Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03181 ATGGTGGTAGAGGAGGGTGAGATGAACTCCCAAGGCGAGGTGGAATCGCGACTCCAACAAGAAGCAAACAAGAACCACAGCCACCATTCTCCATTCTCATCATCATCCCTTGGAAGACAATCATCCATATACTCTCTCACACTGGACGAGTTCCAGCACAGTCTATGCGAGACCGGCAAGAACTTCGGCTCCATGAACATGGACGAGTTCCTCAGCAGCATATGGAACGCCGAAGAGAACCAAGCCATCATAACCTCCTCCAACGTCCCAATGTCCCAAACCTACACTGACAAAGGAACAACAACAACATTAAGGAAACAGCCAAGCCTCCCTCGCCAACCCTCGCTGTCCCTTCCTGCACCTCTTTGTAGGAAAACCGTGGACGAGGTTTGGTCCCAGATTCAGAAGGAACAAAACAACAACAACAACAATAATAACAATGTTCTGAATAATACCGAGTCTGCCCCTCGCCAACCCACTTTTGGCGAGATGACTTTGGAGGATTTTTTGGTTAAGGCCGGGGTGGTTCGGGAAACACCATGTGCACCGCTGCCGGTGTCTCACCATCACCAGCAGCATTACGCGAATAACAACAACAACGTTGCAATGGCTCCTTCTTCTTTTGTTGGTAGGCATGTTATGGGTGGTGGTGCAGTGAGTAACGTGGTTGCACCGGGTTACCAAGTTGGAAATGGTATGAGAGATAGTGGAAGTGGGTATCATTGTTTTGGAGGTGGTGGGTATGGGGTGGGACCCGCAATGGGAATGGGTGGGCCTGTGAGTCCGGCTAATTCTTCTGATGGGATAGGGAATGATGGTGGTCAGTTTGGGCTTGAGATGGGTGGTTTGAGAGGTAGAAAGAGGATGGCGGATGGTCCTGTGGAAAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAATAGAGAGTCAGCTGCCAGATCTAGAGCCAGAAAACAGGCATACACAGTGGAATTAGAAGCAGAACTGAACCAATTAAGAGAAGAGAACTCCCAACTGAAACAGGCGCTGGCCGAGCTCGAGAGGAGAAGAAAGCAACAGTGTTTTGAGGAAGTGAACGTTAGTGTTCAAACCAAAGCTCAGAAAGCAAAAGAGAAACTGAGAGCTTTGAGAAGGAACATGAGTTGTCCTTTGTGA 1158 0.4914 MVVEEGEMNSQGEVESRLQQEANKNHSHHSPFSSSSLGRQSSIYSLTLDEFQHSLCETGKNFGSMNMDEFLSSIWNAEENQAIITSSNVPMSQTYTDKGTTTTLRKQPSLPRQPSLSLPAPLCRKTVDEVWSQIQKEQNNNNNNNNNVLNNTESAPRQPTFGEMTLEDFLVKAGVVRETPCAPLPVSHHHQQHYANNNNNVAMAPSSFVGRHVMGGGAVSNVVAPGYQVGNGMRDSGSGYHCFGGGGYGVGPAMGMGGPVSPANSSDGIGNDGGQFGLEMGGLRGRKRMADGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLKQALAELERRRKQQCFEEVNVSVQTKAQKAKEKLRALRRNMSCPL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03181 385 Coils Coil 316 357 - -
Pumo5g03181 385 Gene3D - 298 353 - -
Pumo5g03181 385 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 383 IPR043452 GO:0003700|GO:0045893
Pumo5g03181 385 SMART brlzneu 296 360 IPR004827 GO:0003700|GO:0006355
Pumo5g03181 385 MobiDBLite consensus disorder prediction 98 119 - -
Pumo5g03181 385 Pfam bZIP transcription factor 300 352 IPR004827 GO:0003700|GO:0006355
Pumo5g03181 385 CDD bZIP_plant_BZIP46 300 354 - -
Pumo5g03181 385 SUPERFAMILY Leucine zipper domain 300 350 IPR046347 GO:0003700|GO:0006355
Pumo5g03181 385 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 303 318 IPR004827 GO:0003700|GO:0006355
Pumo5g03181 385 MobiDBLite consensus disorder prediction 1 38 - -
Pumo5g03181 385 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 298 354 - -
Pumo5g03181 385 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 298 350 IPR004827 GO:0003700|GO:0006355
Pumo5g03181 385 MobiDBLite consensus disorder prediction 137 157 - -
Pumo5g03181 385 MobiDBLite consensus disorder prediction 98 113 - -
Pumo5g03181 385 Coils Coil 360 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03181 Pumo-Chr5 80793530 80795948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03181 1 355 bZIP Transcription Factor Family AT2G36270 50.000 4.54e-104 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g03181 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03181 K14432 - gmx:100818567 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03181 5 80793530 80795948 Pumo5g03181 5 80793530 80795948 ECH
Pumo5g03181 5 80793530 80795948 Pumo3g03100 3 56479345 56482478 PCT