Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03168 ATGATGAACTCCCACAACCAACTCTTCCCCCTCCTCTCTCTTTACTTAGTTCTCTATCTCTCAGGACAAAGGTTGCTGCAAGCAGAGGCTCACCCTCAACATCGTCCAACAAAATTGTTCGTTTTCGGAGACTCATATGCTGACACAGGAAACATTCAGAAAGGTGTCTCAAATTCATGGAAGGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGTCGTTTCTCCGACGGTAGAGTCCTCACCGATTACATCGCTAAGTATTTGAAAGTGAAATCGCCAATCCCCTACAGATTGAGGAAACTGTTGCCGCAACATCTGAAATATGGGATGAACTTTGCGTTTGGGGGTACCGGTGTCTTTAACACGTTGGTTCCACTCCCAAACATGACAACCCAGATCGATTTCTTGGAGCAGCTCATCAAAGACAAAGTCTACACTGCCTTAGATCTCACCAACTCAGTTGCCCTCGTCTCTGTCGCTGGAAATGACTACGGTCGTTACATGCTAACAAATGGCTCAGAGGGTTTACCATCTTTCGTGGCCTCAGTGGTTAATCAAACAAGGACCAATCTGATTCGCATCAAAGGGTTGGGAGTGAAGAAAATTGTGGTGGGTGCTCTACCACCCCTTGGATGCCTTCCCCAGATGACAGCCCAAACCTGGTTCCAACGTTGCAACGCCACCTCAAACGCCCTAGTACTGCTCCACAACAGCCTCTTGAACCAAGCAGTGACCAAGTTGAACCAAGAGACCACCAAGGACCGTTCCACCTTCCAAATCCTCAACCTCTTCGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACCCACAACATTCGGAACAAGTTGAAGCCGTGCTGTGTTGGCGTGAGCAGTGGTTACTCGTGTGGGAGTGTGGACAAGAACAATGTGAAGAAATATAGGGTCTGTGATGACCCCAAATCCGCGTTCTTTTGGGATCTTGTGCACCCTACGGAGGCTGGATGGCATGCAGTGTATAACAAGTTGCGAACCATGAATGCTCTTCAACACATTCTCTACTAG 1050 0.4886 MMNSHNQLFPLLSLYLVLYLSGQRLLQAEAHPQHRPTKLFVFGDSYADTGNIQKGVSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRLRKLLPQHLKYGMNFAFGGTGVFNTLVPLPNMTTQIDFLEQLIKDKVYTALDLTNSVALVSVAGNDYGRYMLTNGSEGLPSFVASVVNQTRTNLIRIKGLGVKKIVVGALPPLGCLPQMTAQTWFQRCNATSNALVLLHNSLLNQAVTKLNQETTKDRSTFQILNLFDSFMSVLNHPSTHNIRNKLKPCCVGVSSGYSCGSVDKNNVKKYRVCDDPKSAFFWDLVHPTEAGWHAVYNKLRTMNALQHILY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03168 349 CDD SGNH_plant_lipase_like 39 338 IPR035669 -
Pumo5g03168 349 PANTHER OSJNBB0059K02.9 PROTEIN 9 345 - -
Pumo5g03168 349 Gene3D SGNH hydrolase 27 346 IPR036514 -
Pumo5g03168 349 SUPERFAMILY SGNH hydrolase 36 338 - -
Pumo5g03168 349 Pfam GDSL-like Lipase/Acylhydrolase 39 337 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03168 Pumo-Chr5 80637935 80642354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03168 16 334 Pollen Coat Proteome AT1G75930 27.168 1.12e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03168 - - gmx:100788092 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03168 5 80637935 80642354 Pumo5g03168 5 80637935 80642354 ECH
Pumo5g03168 5 80637935 80642354 Pumo3g03118 3 57052214 57053158 PCT