Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03165 ATGAACAACGTGACGATGATGGATGCCGAATCGGAGAAGCGCTCTGCTTCCACCTCTTCTTCTTCTCCGTCGTCTTCCTACTCCTCTTCCTCCTGCGACCGTTTGGATCGGCTCGTCGACACCGAGGAGATTGAGGCGGCGGAGACTCTGGCGCAGTTGGCAATGCGCGACACTCACTGCGCCAATAAATGGTGCACCAAACAAGGCGCCACCCGAGTCACGCCCGAGTCACCGACTCTTGACTCGGATCTCTCTCTTGGGCCTGGGGGCCAAGCTATTGCAGGTCAGCAGCTAGATGAAAAAATATCCACTACATCTGTAGAAACAGAAATGATTCAGCAGGATGACTGCTCGACACACATGAAGGTGGAGCAGGATGCTGATTTATTACCTAACACAAGTTGCTCTTTAGTTCGAAGCAGCAAGTCAAGGCGAAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATACGCAGGATATTGGCAAATAGAGAGTCAGCTAGACAGACAATTCGCCGTAGGCAGGCTCTGTGTGAGGAGTTAACCAGAAAAGCTGCTACTTTGGTGGTGGAGAATGAAAACCTAAAGAGGGAGAAAGAATTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGCACTTAAAGGCACAAATAGCCAAGTCAATAAACACTGAAGTGGAGAAAACTCCTGTTCAGCCGGAGTCATCTGTGGCTGAGGTAACACCTTTGTCTGGTAACGGTCCATGGTTCCTTTATAACCATTTTCCAGTTCCACAGATGTTTTGGCCTTCCATCGTTCAGTCTTCTAATCCAGTTCATTTACAAAATACATCATTTAATTCCATCGTCATTCCATCTAATGCTAATGTTCCATGTTCTTTCGGGTCTGAATCATGCTCCAAGCAAAATAACCTTATAAATGATGATCGAACACAAAATCCATTTTACATGTTTCCATGTCCTTGGTTATTCCCTCTTCCACAGTTTGGAAATGGACAATCATCACCTTCCAGTAGCCTGAAAGATAAACAAGATAGTCTTTCTCTAGGTAAACCATGTAGTTCTAGTTCATCTTTGAATACACTCACAAATGTGGATTATCAAGCAGCTCTACCTATCAAACTTAAAACAGAAGCTTCTGGCTGGACAGAGGCCTTCCCTACTAATGACAATGGTTTTGCCACTCCAAGATTTTCTTTGGATGGAGGTGAGAAGAAAACAGGATGTCACATTAAGTTTCATGGACCTGCACTTGGCTGTAATGGTCATGCTTCTGCTGTCAAACAAGAACATGAACTTCAACTACATTCTGCTCCTAACAACAAAGTATCTTCAACAGCTTATATTGCAACTTCTTCGCTGGAAATGAAACAAGAACAGTTCATTTGTCAGGGGAAAAATCTAGCAGATGCAGTTGCTGCAGCAGAAGCAAGAAAGAGGAGAAAGGAACTAACAAAGCAGAAAAGCATCCACAACCGCCAGTCTCGGATGCACTGTTGA 1506 0.4422 MNNVTMMDAESEKRSASTSSSSPSSSYSSSSCDRLDRLVDTEEIEAAETLAQLAMRDTHCANKWCTKQGATRVTPESPTLDSDLSLGPGGQAIAGQQLDEKISTTSVETEMIQQDDCSTHMKVEQDADLLPNTSCSLVRSSKSRRNLTEEEKEARRIRRILANRESARQTIRRRQALCEELTRKAATLVVENENLKREKELALKEYQSLETTNKHLKAQIAKSINTEVEKTPVQPESSVAEVTPLSGNGPWFLYNHFPVPQMFWPSIVQSSNPVHLQNTSFNSIVIPSNANVPCSFGSESCSKQNNLINDDRTQNPFYMFPCPWLFPLPQFGNGQSSPSSSLKDKQDSLSLGKPCSSSSSLNTLTNVDYQAALPIKLKTEASGWTEAFPTNDNGFATPRFSLDGGEKKTGCHIKFHGPALGCNGHASAVKQEHELQLHSAPNNKVSSTAYIATSSLEMKQEQFICQGKNLADAVAAAEARKRRKELTKQKSIHNRQSRMHC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03165 501 SMART brlzneu 151 215 IPR004827 GO:0003700|GO:0006355
Pumo5g03165 501 MobiDBLite consensus disorder prediction 482 501 - -
Pumo5g03165 501 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 287 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pumo5g03165 501 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 153 216 IPR004827 GO:0003700|GO:0006355
Pumo5g03165 501 MobiDBLite consensus disorder prediction 486 501 - -
Pumo5g03165 501 SUPERFAMILY Leucine zipper domain 155 210 IPR046347 GO:0003700|GO:0006355
Pumo5g03165 501 MobiDBLite consensus disorder prediction 335 357 - -
Pumo5g03165 501 Coils Coil 476 496 - -
Pumo5g03165 501 MobiDBLite consensus disorder prediction 1 34 - -
Pumo5g03165 501 Coils Coil 164 219 - -
Pumo5g03165 501 CDD bZIP_plant_GBF1 156 207 IPR045314 GO:0003700|GO:0006355
Pumo5g03165 501 Pfam bZIP transcription factor 151 213 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03165 131 501 bZIP Transcription Factor Family AT1G19490 37.731 1.23e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g03165 bZIP_1 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03165 - - gmx:778152 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03165 5 80582174 80587668 Pumo5g03165 5 80582174 80587668 ECH