Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g03162 | ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAAGGGAGGAGCTAAATACAAGGAAAGCTCCTGGGGTTTATCAGTCCAGTTCTGAGTGTAGCACGTCTGAGAAAAATCAGAAACTTTCGGTGCTGAAATTGGGATACAAGGATGATCTAGATGATGATATCAACAAGCTTTTTGAATCGATTGCTCTTAAATCTTCATCAAGGGATTTGAGCCTTTTCTCAGATGGCACAAGTCCTAGGCTGAAAAGTGCATTGAAAAAGCCAATTACAATGGGTGTTCCTCGGTCCCCAAGAGTTGGGACTTCTGAGCCTGTTAATTTGAAGCAAGCATTAAGAGACCTTTGTATATCTAAGGCATCAGAAATGGCTGCTATGAGACGATTATCAAAGTCAACAGCTTCTCCAAGATTATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAACCAGTCGATCTGGGTCTTCCTTTGTTGAGAGCAAGGGGCGTCAAATTGAAATATCTCTAGTGCCACAAAAAGGCAAAACCCTTTCCTTGGAGAAAACCTCTCATTCTTATCAAACTTCCCAAATTGCATCGTCGAGCCGAAACATTCATTCGTCTCGGGAAATTGCTGTTGCAACTACTAAATATGATGCTGTGACTTCATTGATACAAAGTGATTTGGCATGCTCATCAAGTAAAGTTGGGATTCAATCACAACGAGTGGTTCCTGTTGAAACAGAAGAACAAGCATCTGCCTCTTCTCCCTCTCTTTATAATACATTTGGAAGCAAATCAGAGGTGCCCAAAAATGCTTCTTCCCCTAAAAAGTTGGGAAATAAAGCATTTGTGTCAAATACTGGGAAGAAAGTTAGGTTGCAAACAGTATCTTCATCTACTTCTGTAAATGACAACAGAGTTAACAAACTGCCACGCCATGCCCCCCGCACTGTTAAATCGGTCATCAAGAACAAGAATCTGAGTAAGAAGAAACAAAAGGAGGATTCAGGTTCTGCTTTATGTGGTCCTACGCCCAATGAAGTTAATAAGCCAGTTCCTGGTACACCTCGGCTAATTTGTGAGAGATGTAGGTGTGCTTTGGAAAATACAAGTGAAGAAAAAAACCAAGATATTGTGGCATTGGACTCTACCAGTCCTGGAAATGGAGTAAACTCGAGTAATGTGCACTCTGGTTCAAATAAACCTGGTTTGGTGTCAAGTAGTGTTAATAAAAGCAAAACAGTTGGAAAAGTGAAGAACTCCAAGTTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTAAGTGGTTCAAGTCGTAGCACTAGGCCTCACATGTCAAAGGATGTCAGGTGGGCAGCCATACGACATGCTCAAATGCAGTATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTAAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTGGCGGAACTAATTGGCACTAGCTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGAAGAAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATCCTGGATCATCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATATTTCTCGGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAATGCTTCTGAAATCATCTTCTGATGTGGACCCTGCAAAAATTTCTGGTCTAAGTGCACAGTCAAGTTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTGCTACCGGCTGCTGCAAAAGCAAGGAAACTAAAAGTTGATCTTGCAGCCCAGGTCAGATCATTGCCGCAGCTTGTGGCCGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGTACACATGAATACTTGGCTCCTGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCAAACAATGAAGAAACATTGGCCAACGTAGTGTTGCAGGGTCTTAGATTCCCTGAGCACCCGAATGTTAGTTTCCATGCAAAGGATCTGATTAGAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATTAAACAGCATCCCTTCTTTGAGGGCCTTAACTGGGCCTTAATTCGTTGTGCCATCCCTCCAGAACTTCCAGACTTCTATGATTTTGGTGTTTCAGACATGATGAACTCACAGGGCAAGGGTGCTAAGTACTTAGAGTGTAAAGTAGGAGAGCATGTAGAATTCGAGTTGTTTTAA | 2613 | 0.421 | MGSFSGTCEIVEAREELNTRKAPGVYQSSSECSTSEKNQKLSVLKLGYKDDLDDDINKLFESIALKSSSRDLSLFSDGTSPRLKSALKKPITMGVPRSPRVGTSEPVNLKQALRDLCISKASEMAAMRRLSKSTASPRLSEVGKIQTLYNSVVAETSRSGSSFVESKGRQIEISLVPQKGKTLSLEKTSHSYQTSQIASSSRNIHSSREIAVATTKYDAVTSLIQSDLACSSSKVGIQSQRVVPVETEEQASASSPSLYNTFGSKSEVPKNASSPKKLGNKAFVSNTGKKVRLQTVSSSTSVNDNRVNKLPRHAPRTVKSVIKNKNLSKKKQKEDSGSALCGPTPNEVNKPVPGTPRLICERCRCALENTSEEKNQDIVALDSTSPGNGVNSSNVHSGSNKPGLVSSSVNKSKTVGKVKNSKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWAAIRHAQMQYGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRYFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPMLLKSSSDVDPAKISGLSAQSSCIEPFCIEPSCQVPCFSPRLLPAAAKARKLKVDLAAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPEHPNVSFHAKDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDFYDFGVSDMMNSQGKGAKYLECKVGEHVEFELF | 870 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g03162 | 870 | MobiDBLite | consensus disorder prediction | 312 | 326 | - | - | |
Pumo5g03162 | 870 | ProSiteProfiles | Protein kinase domain profile. | 487 | 819 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03162 | 870 | SMART | serkin_6 | 487 | 819 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03162 | 870 | MobiDBLite | consensus disorder prediction | 247 | 307 | - | - | |
Pumo5g03162 | 870 | FunFam | serine/threonine-protein kinase D6PK-like | 714 | 837 | - | - | |
Pumo5g03162 | 870 | FunFam | Serine/threonine-protein kinase D6PK-like | 485 | 570 | - | - | |
Pumo5g03162 | 870 | MobiDBLite | consensus disorder prediction | 374 | 463 | - | - | |
Pumo5g03162 | 870 | PANTHER | FLIPPASE KINASE 1-RELATED | 265 | 840 | - | - | |
Pumo5g03162 | 870 | FunFam | serine/threonine-protein kinase D6PK-like | 571 | 638 | - | - | |
Pumo5g03162 | 870 | Pfam | Protein kinase domain | 716 | 819 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03162 | 870 | Pfam | Protein kinase domain | 488 | 636 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g03162 | 870 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 608 | 620 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo5g03162 | 870 | Gene3D | Transferase(Phosphotransferase) domain 1 | 712 | 828 | - | - | |
Pumo5g03162 | 870 | MobiDBLite | consensus disorder prediction | 247 | 353 | - | - | |
Pumo5g03162 | 870 | CDD | STKc_phototropin_like | 485 | 837 | - | - | |
Pumo5g03162 | 870 | MobiDBLite | consensus disorder prediction | 374 | 416 | - | - | |
Pumo5g03162 | 870 | MobiDBLite | consensus disorder prediction | 425 | 460 | - | - | |
Pumo5g03162 | 870 | Gene3D | Transferase(Phosphotransferase) domain 1 | 567 | 635 | - | - | |
Pumo5g03162 | 870 | SUPERFAMILY | Protein kinase-like (PK-like) | 461 | 843 | IPR011009 | - | |
Pumo5g03162 | 870 | Gene3D | Phosphorylase Kinase; domain 1 | 485 | 566 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g03162 | Pumo-Chr5 | 80551242 | 80556484 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g03162 | 1 | 870 | AGC Kinase Gene Family | AT3G52890 | 52.079 | 0.0 | 834 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Pumo5g03162 | Pkinase | 2.6e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g03162 | - | K08286 | gmx:100792120 | 1547.72 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo3g03131 | 3 | 57592012 | 57596704 | Pumo5g03162 | 5 | 80551242 | 80556484 | ECH | |
Pumo5g03162 | 5 | 80551242 | 80556484 | Pumo5g03162 | 5 | 80551242 | 80556484 | ECH | |
Pumo5g03162 | 5 | 80551242 | 80556484 | Pumo3g03131 | 3 | 57592012 | 57596704 | PCT |