Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03154 ATGGCTCAGAAGTACTTGCACGAGCTACTTGAGGAGGATCAAGAGCCGTTCCTTCTAAACAAGTACATTTCCGATAGGAGAAGCCAGATGAAAAGGGCTTCCCCGAAGACCAGTTTGCAAGTGAAGAAACGCAAATCGACGAATCCAAACGCAAACTTCCCGGGGAATCTCTGCAAAAGCGCTTGTCTTTTCTCCCTCACAGACACCCCAGACCTCAGAAAATCTCCACTCTTGGAATTCACATCCCCAGCCAAAAGCCCTTGCAAATCACCCAACGCTATTTTCCTTCACATCCCTTCCAGAACTGCAGCTCTGCTTCTAGAAGCCGCTCTCAGGATCCAGAAACACTCCTCACAAACTTCTCGGCCCAAAACAAAAGCCCAATCCTTCGGCCTCTTGGGCTCACTTTACAAGAGACTCACGCAACGGAGCCAGAAAAAGCGCGAGATAGAGGGTGGTGGAGGCGTTAAGGTCTCGGTGAAGGATATTTTGAAGTGGGACTCCTCTGTTGGGAGAAGAAAAAACTCCAACAAGAAGGAGCAAGAAAAAACGGTGAATGTGAATGCGTGCGATGTGGGGTTTGCGTGTTCTTACAATGGTAGGCCTAGTAGTGCTGTTTGGTCAGAGACCAATGAAGATAAATCACTCGACATGGAAACCTCAAGTAGTGGCTACTCTGAAGAGATTCACTTCATAACCAATAACAAACACTCCACGTGCTTCTGCGAAAGCCCGTTCCGTTTTGTCCTCCAAACAAGTTCTCCTTCATCCGGCCACCACACGCCGGAGCTTCCCTCGCCGAGTCGCCACGCAACTCAGGACAAAGAAAGTAATGAAGGTGAGAGTGTGGACAAATTCCAACCAGGGGAAGAAGAGGAGGAGGATAAGGAACAGTGCAGTCCAGTGTGTGTGTTAGACCCACCTTTCGAGGACGATGACGAAGGGCATAGAAACGGTGAAGAAGAAGAAGAAGAAGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCAATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAGCTTCGTAGATTTGAGAAACTGGCAGAGTTGGATCCAGTAGAACTTGAGAAAAGAATGCAGGATCAAGAAGAGGAGGAGGATGAAACATTTATGGAAGAGGAAGATGGTGATGATGAGAAGAACGAAGCATCATGTAAAGAAAATGACTTTAGAGAACTAATTTTCCAAGCTTTGTTCCAGTCAAGGGTCTATGACAGACAGCAAATCCCAGAGGACTTTAAGAAGCTGGTTTCTGATCTCATTATGGAAGAAGAGAGGGAACTTGGTTCCTCAGAAGATAGGGACATGGTGATAAGAAGGATATGCAAGAGGCTGGAATTGTGGAAAGAAGTGGAGTCCAACACAATTGATATGATGATAGAAGATGACTTCTCTAGAGAGGATGGTGGGTGGAAGAAAAATATAGAGCAGATAAGAAATATGGCTGGGGAGCTTGAGCTTGCTATCTTTGGCTTTCTGGTAGAGGAATTTTCAGAGGAACTAGTGTGTTAA 1539 0.462 MAQKYLHELLEEDQEPFLLNKYISDRRSQMKRASPKTSLQVKKRKSTNPNANFPGNLCKSACLFSLTDTPDLRKSPLLEFTSPAKSPCKSPNAIFLHIPSRTAALLLEAALRIQKHSSQTSRPKTKAQSFGLLGSLYKRLTQRSQKKREIEGGGGVKVSVKDILKWDSSVGRRKNSNKKEQEKTVNVNACDVGFACSYNGRPSSAVWSETNEDKSLDMETSSSGYSEEIHFITNNKHSTCFCESPFRFVLQTSSPSSGHHTPELPSPSRHATQDKESNEGESVDKFQPGEEEEEDKEQCSPVCVLDPPFEDDDEGHRNGEEEEEEEEGGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELEKRMQDQEEEEDETFMEEEDGDDEKNEASCKENDFRELIFQALFQSRVYDRQQIPEDFKKLVSDLIMEEERELGSSEDRDMVIRRICKRLELWKEVESNTIDMMIEDDFSREDGGWKKNIEQIRNMAGELELAIFGFLVEEFSEELVC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03154 512 MobiDBLite consensus disorder prediction 369 389 - -
Pumo5g03154 512 MobiDBLite consensus disorder prediction 253 330 - -
Pumo5g03154 512 MobiDBLite consensus disorder prediction 315 330 - -
Pumo5g03154 512 MobiDBLite consensus disorder prediction 28 50 - -
Pumo5g03154 512 PANTHER OS04G0572500 PROTEIN 1 510 - -
Pumo5g03154 512 MobiDBLite consensus disorder prediction 269 285 - -
Pumo5g03154 512 MobiDBLite consensus disorder prediction 253 268 - -
Pumo5g03154 512 MobiDBLite consensus disorder prediction 365 392 - -
Pumo5g03154 512 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03154 Pumo-Chr5 80401514 80405170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03154 2 310 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 43.713 1.86e-61 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03154 - - gmx:100790018 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03154 5 80401514 80405170 Pumo5g03154 5 80401514 80405170 ECH
Pumo5g03154 5 80401514 80405170 Pumo3g03134 3 57652515 57656800 PCT