Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03144 ATGGAAATGCCCGCCAGAAGATCCAGCAACTACTCCCTCCTCAGTCAAACTCCCGACGACAAGTTAACGGCGCCGTTGTTCGGTTCCTCCTCCGGCGACGGTAAAAACAAGTTTGAGAGAGTCTCTGATTGGGACTCCGGCGTGGATCACCGGCAGGGGAATCGGATCGGGAATTTGTACCCCTCGTTCGGACTGCAGCGGCAGTCCAGCGAGAGCAGTTTCGGCGAGAGCTCGCTCTCCGGCGAGTTTTACGCGCCGACTCTGTCGACCGTGGCGGCCAATGAGATCGATGGATTCAAATTCGGCGAGGTCAGAGGCAGGTTTCCTCGGAGCGGAGGGTCCTCCAGCAAGAGCTGGGCGCTGCAGACGGAGGAGAGTTATCAGTTACAGCTGGCATTGGCTCTTCGGCTTTCCTCGGAAGCCACGTGTGCTGATAATCCCAATTTTCTGGATCCCGTGCCCGATGATTCCGCGTTGAGGTCTTCGTCCTCGTCGTCTTCCGCAGAGGCAGTATCGCATAGGTTCTGGGTGAATGGCTGCCTATTATACTTCGACAAAATTCCTGATGGCTTTTATCTAATTCATGGGATGGATCCCTATGTATGGACTGTGTGCACTGATCTTCAGGAAAATGGCCGAATTCCTTCACTTGAGACACTAAAATCTATAAATCCTTCTTCTGATTCTTCACTTGAAGTAGTTTTGGTGGATAGACGTAGTGATCCTAACTTAAAACAACTGCAAAACAAAGTACATGACATTTCTTGTCACTGCATAGCAACAACAGATGTTGTAGACCAGCTTGCGAAGCTGGTTTGCAATTGTATGGGGGGTTCAGCTTCTGTATGGGAAGATGATCTTTTTCCTATATGGAAGGAGCGCATTAATGATCTAAGAGATTGCTTAGGATCTGTTGTTGTACCTATTGGCAGTCTATCTACTGGACTTTGCAGGCATCGTGCCGTATTATTCAAAGTACTAGCTGACACCATTGATTTACCGTGTCGCATTGCTAAGGGCTGTAAATATTGTTCAAGAGATGATGCCTCCTCATGTCTTGTTCGATTTGGGCTTGACAGGGAATACATGGTTGATCTAATTGGGAAGCCGGGTTGCTTATGCGAGCCTAATTCCTTGCTCAACGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGATTGTATGTCTGCTGAGCTTGTCTTTGATAGTAGTTCTGCAGAACAGTATGAAAGGCAGTACAGGGACAGGAACCCCGGGCCAATTCCAAATGATAACAACAGAAGTTCTCTTGTTCCTCTGCATCCACAACCTTATCATTCAAGTGCACATGATCGAGGCTTTGAAATATTTAAATCAGGTAACCCTCCTCAAAATGTTGTAGAGCCGACAATGACAAGCCGGGATTCATTGCCTTTAAAGCATAACCGTCCTGGTTATAGAGATACACAGACCCGACTACTGATTCCTAGCAAACCAACTAGAGAGCTTTCCCTTGATATGGAGGATTTGGACATACCGTGGACTGATCTTGTTTTAAAAGGGAGAATAGGATCAGGTTCTTTTGGAACTGTACATCACGCTGAGTGGAATGGCTCGGAGGTTGCTGTGAAAATTCTGATGGAACAAGACTTCAAAGGTGAACGCTTCAAGGAATTCCTGAGGGAGGTTGCAATAATGAAAGGTTTACGTCATCCAAACATCGTTTTACTTATGGGTGCAGTCACTAAGCCTCCTAATTTATCAATTGTCACAGAATATTTGTCAAGGGGTAGCTTGTATAGGCTGTTGCATAAACCTGGCGCCACAGAGATGTTGGATGAGAGACGTAGGCTAAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGCAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTGGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTCCGTGATGAACCATCCAATGAGAAGTCTGATGTCTACAGCTTTGGTGTCATCTTGTGGGAGCTTGCAACATTGCAACAGCCTTGGGGTAATTTGAATCCACCACAGGTTGTGGCGGCTGTTGGCTTTAAGGGAAAAAGACTTGAGATACCACGTGATTTAAATCCTCTATTAGCCTCAATAATTGAGGCTTGTTGGGCCAATGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGTATTGCTCAAACCCCCTATGCCTCAACCTGGTCGTCCAAACATGTCATTACTTACCTGA 2424 0.4604 MEMPARRSSNYSLLSQTPDDKLTAPLFGSSSGDGKNKFERVSDWDSGVDHRQGNRIGNLYPSFGLQRQSSESSFGESSLSGEFYAPTLSTVAANEIDGFKFGEVRGRFPRSGGSSSKSWALQTEESYQLQLALALRLSSEATCADNPNFLDPVPDDSALRSSSSSSSAEAVSHRFWVNGCLLYFDKIPDGFYLIHGMDPYVWTVCTDLQENGRIPSLETLKSINPSSDSSLEVVLVDRRSDPNLKQLQNKVHDISCHCIATTDVVDQLAKLVCNCMGGSASVWEDDLFPIWKERINDLRDCLGSVVVPIGSLSTGLCRHRAVLFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYMVDLIGKPGCLCEPNSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCMSAELVFDSSSAEQYERQYRDRNPGPIPNDNNRSSLVPLHPQPYHSSAHDRGFEIFKSGNPPQNVVEPTMTSRDSLPLKHNRPGYRDTQTRLLIPSKPTRELSLDMEDLDIPWTDLVLKGRIGSGSFGTVHHAEWNGSEVAVKILMEQDFKGERFKEFLREVAIMKGLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGATEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVGDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPPQVVAAVGFKGKRLEIPRDLNPLLASIIEACWANEPWKRPSFSSIMDSLKVLLKPPMPQPGRPNMSLLT 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03144 807 MobiDBLite consensus disorder prediction 477 502 - -
Pumo5g03144 807 Pfam Protein tyrosine and serine/threonine kinase 534 787 IPR001245 GO:0004672|GO:0006468
Pumo5g03144 807 SMART serkin_6 533 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03144 807 FunFam Serine/threonine-protein kinase CTR1 612 797 - -
Pumo5g03144 807 MobiDBLite consensus disorder prediction 479 493 - -
Pumo5g03144 807 CDD STKc_MAP3K-like 539 787 - -
Pumo5g03144 807 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 145 789 - -
Pumo5g03144 807 MobiDBLite consensus disorder prediction 1 49 - -
Pumo5g03144 807 Gene3D Phosphorylase Kinase; domain 1 526 611 - -
Pumo5g03144 807 ProSiteProfiles Protein kinase domain profile. 533 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03144 807 Pfam Ethylene-responsive protein kinase Le-CTR1 168 374 - -
Pumo5g03144 807 PRINTS Tyrosine kinase catalytic domain signature 695 705 IPR001245 GO:0004672|GO:0006468
Pumo5g03144 807 PRINTS Tyrosine kinase catalytic domain signature 648 666 IPR001245 GO:0004672|GO:0006468
Pumo5g03144 807 PRINTS Tyrosine kinase catalytic domain signature 714 736 IPR001245 GO:0004672|GO:0006468
Pumo5g03144 807 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672|GO:0006468
Pumo5g03144 807 PRINTS Tyrosine kinase catalytic domain signature 607 620 IPR001245 GO:0004672|GO:0006468
Pumo5g03144 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Pumo5g03144 807 Gene3D Transferase(Phosphotransferase) domain 1 612 796 - -
Pumo5g03144 807 ProSitePatterns Protein kinases ATP-binding region signature. 539 560 IPR017441 GO:0005524
Pumo5g03144 807 SUPERFAMILY Protein kinase-like (PK-like) 509 787 IPR011009 -
Pumo5g03144 807 MobiDBLite consensus disorder prediction 431 451 - -
Pumo5g03144 807 MobiDBLite consensus disorder prediction 8 24 - -
Pumo5g03144 807 FunFam Serine/threonine-protein kinase isoform 1 523 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03144 Pumo-Chr5 80240896 80253425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03144 1 803 MAP Kinase Kinase Kinase AT5G03730 65.141 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo5g03144 PK_Tyr_Ser-Thr 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03144 K14510 - gmx:100810555 1489.94