Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03110 ATGGTATATATATATAAATTTATATATTTATTTATTTTCATGTATCTATCAATCTATCTATGCGTGCGTGGTAGTCTCAGATTGATTTATTTTCTTTATGTCGACTTTGAATTGATGTTTTATAGAATGTCCATTTTTGCAACAATGGGATTTAAGCAGGACACTGCAGGACTTCTGGTACCTCCTTGGCTTGAACAACTTCTTCACACACCCTTCTTCAACGTGTGTCGGATTCACGCAGACGCAGCTAGAAGCGAGTGTAACATGTTTTGCCTAGATTGCAATGGCGAAGCCTTTTGCTTTTATTGCCGTTCCTCAAGACACAAAGATCATCAAGTCATTCAGATAAGGCGATCTTCTTATCACGATGTAGTGAGGGTCTCAGAAATTCAGAAAGTGTTGGACATAAGTGGAGTGCAGACATATGTGATCAACAGTGCTCGAGTTTTGTTCCTCAATGTGAGGCCTCAGCCAAAATCTGGAAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGCCTCTTGGATCCATTTCGGTTTTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAATGGGGATGCAAGCTTTGCTTTGGATGGTAGGAATGAAGAATTGACATTGGATAGTTCAAGGGGATCAGTCTCGTCAAGACAACAAGAAGAAGGATTGCGTGAAGGTTCAACACAAGACATGTATCCAGCCACGCCTTCTCCACCTGCTTCAAATGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGCTCCTAA 783 0.4087 MVYIYKFIYLFIFMYLSIYLCVRGSLRLIYFLYVDFELMFYRMSIFATMGFKQDTAGLLVPPWLEQLLHTPFFNVCRIHADAARSECNMFCLDCNGEAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLEGIKKNGDASFALDGRNEELTLDSSRGSVSSRQQEEGLREGSTQDMYPATPSPPASNARRRKGIPHRAPFGS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03110 260 MobiDBLite consensus disorder prediction 210 225 - -
Pumo5g03110 260 SUPERFAMILY B-box zinc-binding domain 73 118 - -
Pumo5g03110 260 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 58 258 - -
Pumo5g03110 260 MobiDBLite consensus disorder prediction 210 260 - -
Pumo5g03110 260 Pfam PLATZ transcription factor 117 188 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03110 Pumo-Chr5 79897779 79900204 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pumo5g03110 PLATZ 8.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03110 - - gmx:100803083 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03110 5 79897779 79900204 Pumo5g03110 5 79897779 79900204 ECH
Pumo5g03110 5 79897779 79900204 Pumo3g03180 3 58421051 58422489 PCT