Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03089 ATGGTGGTGGCAGAGTTCAGTAGTGGTGGTTTGAGGGGAATGAAGGCCTTCAGCTACCATGTTCTCACGGGGCGTTGGTTCATGCTATTTGCATCTTTACTCATCATGTCCGTTGCAGGGGCAACCTACATGTTTGGAATATACTCTAACGAGGTCAAAACCTCTTTAGGGTACGACCAAACCACTCTCAACTTGCTAAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCATATCCGGGTTGGTCAACGAGGTAACACCACCTTTTGTGGTGCTCTCAATTGGGGTCATCATGAACTTCTTTGGCTACTTCATGATATTTCTTGCTGTCTCTGGCCGCATTGCGAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTAGTCACGTGTGTCAAAAACTTCCCTGGAAGCCGTGGCAGTATCTTAGGCCTACTCAAAGGTTATGTTGGTCTAAGTGGTGCCATCATCACACAGCTCTACCATGCCTTCTATGGTGATCGCAACTCTCAAGCTCTTATCTTACTCATTGCGTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGGATAATGAACACACTGCACCAATCCAAAGACAACAAAGTGTTCTACCACCTTCTATATATTTCACTTGGCCTTGCTGCGTTTCTCATGGTTCTGATTGTTGTGCAAAACAAGCTCAGTTTCTCAAGGATTGAGTACATAGTCGATGGCCTTGTGGTTTTCTCCTTTCTTCTTCTCCCACTTGCTGTGGTGTTTAGAGAGGAGATAAACCAATTGAAAGCCAAAACGCAAGATTTGACCGATTCACCACCCCAGTTGAAAGTAGTCACTGAAGCTATTCCACCTCCAATTCCAAACGTGGAGCAAGAAGTAGTACCAGCTACAACAAGTTCCCACGAGAAAGGTTCTTGTTTAAGGAACATATTCAACCCCCCAAAGAGGGGAGAAGACTACACCATCTTGCAAGCACTTTTCAGTATTGACATGCTGATTTTGTTCATTGCAACAACATTTGGTGCTGGCGGAACATTAACTGCCATAGACAACCTGGGACAGATTGGACACTCATTAGGATACCCGAACAAAAGCACTACAACCTTTGTGTCCTTAGTGAGCATATGGAACTACTTGGGACGAGTAGCTTCAGGTTATGCCTCTGAAATCTTCTTGACCAAATACAAAGTCCCTCGTCCCTACATGCTCACTGTAGTTTTGCTTCTCTCTTGTGTTGGCCATGTTCTGATAGCCCTTGGTGTCCCAAACTCTCTCTACTTCGCTTCGGTGGTTATTGGGTTTTGTTTCGGAGCTCAATGGCCTCTAATGTTTGCAATCATATCAGAAGTTTTTGGCCTCAAATACTACTCCACGTTGTACAACTTTGGAGCCGCGGCAAGCCCTCTTGGGTCTTACATTCTAAACGTGAAAGTGGCTGGTGTTTTGTATGACAAAGAGGCTTTGAAACAATTGAAGGCCAAAGGACTCACGAGACAAGCAGGGAAGGACCTAACTTGCGTGGGAGTGCAATGCTACAAAATGGCTTTTATCATAATCACGGCTTCAACGTTGGTTGGTTGTTTAGCTTCGGTCATTTTGGCACTGAGAACTAGAAAATTTTACAAAGGGGATATCTATAGAAAGTTTAGAACGGAGCATGAAGCAGCAGAGAATGAGATGGAGATTACCAAGACTGGTAATTAA 1755 0.4462 MVVAEFSSGGLRGMKAFSYHVLTGRWFMLFASLLIMSVAGATYMFGIYSNEVKTSLGYDQTTLNLLSFFKDLGANVGVISGLVNEVTPPFVVLSIGVIMNFFGYFMIFLAVSGRIAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSILGLLKGYVGLSGAIITQLYHAFYGDRNSQALILLIAWLPAAVSFLFLPTIRIMNTLHQSKDNKVFYHLLYISLGLAAFLMVLIVVQNKLSFSRIEYIVDGLVVFSFLLLPLAVVFREEINQLKAKTQDLTDSPPQLKVVTEAIPPPIPNVEQEVVPATTSSHEKGSCLRNIFNPPKRGEDYTILQALFSIDMLILFIATTFGAGGTLTAIDNLGQIGHSLGYPNKSTTTFVSLVSIWNYLGRVASGYASEIFLTKYKVPRPYMLTVVLLLSCVGHVLIALGVPNSLYFASVVIGFCFGAQWPLMFAIISEVFGLKYYSTLYNFGAAASPLGSYILNVKVAGVLYDKEALKQLKAKGLTRQAGKDLTCVGVQCYKMAFIIITASTLVGCLASVILALRTRKFYKGDIYRKFRTEHEAAENEMEITKTGN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03089 584 Gene3D MFS general substrate transporter like domains 324 557 IPR036259 -
Pumo5g03089 584 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 564 - -
Pumo5g03089 584 FunFam Nodulin family protein 339 560 - -
Pumo5g03089 584 Pfam Nodulin-like 25 271 IPR010658 -
Pumo5g03089 584 SUPERFAMILY MFS general substrate transporter 25 560 IPR036259 -
Pumo5g03089 584 CDD MFS_Mch1p_like 24 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03089 Pumo-Chr5 79216676 79218900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03089 7 569 Nodulin-like Gene Family AT2G39210 66.143 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03089 - - gmx:100797779 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03089 5 79216676 79218900 Pumo3g00252 3 3235754 3237981 ECH
Pumo5g03089 5 79216676 79218900 Pumo5g03089 5 79216676 79218900 ECH
Pumo5g03089 5 79216676 79218900 Pumo3g03228 3 59576212 59577189 PCT