Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03088 ATGGCTGTGGCAGAGTTCACTGGTACTGGTGGCGTGAGAGGAATGAAGACCTTGAGCTACCATGTTCTCACGGGGCGTTGGTTCATGCTCTTTGCATCATTAATCATCATGGCCGCTGCAGGAGCAGCCTACATGTTCGGCATGTACTCTAACGAGGTCAAAACCTCTTTGGGGTACGACCAAACCACTCTCAACTTGCTCAGCTTCTTCAAAGATGTTGGTGCCACTGTTGGAATCATATCCGGGTTAGTCAATGAGATAACCCCACCCTGGGTGGTTCTCTCAATTGGGATCATTATGAACTTCTTTGGCTACTTCATGATATTTCTTGCTGTCACTGGCCACATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGCTCAAATTCTCAAACCTTTGCCAACACTGGTGGCACTGTCACGTGTGTCAAAAACTTCCCAGGAAGCCGTGGCAATGTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGTGCCATCATTGCACAGCTCTACCATGCCTTCTATGGTGATCATAACCCTCAGGCTCTTATCTTACTCATTGCTTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACTATTCGGATATTCAACACGGTTCACCATCCCAATGAGAACAAAGTTTTCTACCACCTTCTATATATTTCACTCGCCCTTGCCGGGTTTCTCATGGTTTTGATCATCATGCAAAACAAGCTCAGTTTTACAAGGCCCGAATACATAGCCGGTGGGGTTGTGGTTTTTTTCTTTCTCCTTCTCCCACTTGTTGTGGTGTTTAGAGAAGAAATAAACCAATTGAAAGCCAAAACGCAGGGTAATTTGACCGATTCAGTAAAAGTAGTCACTGAAGTTATTCCACCTCCAAACGTGGAGCAAGAGCAAGAAGTGAAAAGTTCTTGTTTAGGGAACGTACTCAAACCCCCCAAAAGGGGAGAAGACTACACCATCTTGCAAGCACTTTTCAGTATTGACATGCTGATTCTGTTCATTGCAACAACATTTGGTGCTGGTGGAACATTAACTGCCATAGACAATTTTGGACAAATTGGACGCTCATTGGGGTACCCAAGAAAGAGCATCACAACATGTGTGTCCTTATTGAGCATATGGAACTACTTGGGAAGAGTAGTCGCAGGTTACGCCTCTGAATTCTTCTTAACCAAATACAAACTCCCCCGTCCCTACATGCTCACGATAGTTTTGCTTCTCTCTTGTATTGGCCATATTCTGATAGCCCTTGGTGCCCCAAACTCTCTCTACTTTGCTTCGGTGATTATTGGGTTCTGTTTGGGAGCTCAGTGGCCGCTAATGTTTGCAATCATATCAGAAATTTTTGGCCTCAAATACTACTCCACGTTGTACAACTTTGGAGCCGTGGCGAGCCCAGTTGGGTCTTACATTCTGAACGTGAGACTCACCGGTGTTTTGTACGATAAAGAGGCTTTGAAACAGTTGAAGGCCAAAGGACTCACGAGAGAAGAAGGGAAGGAACTAAATTGCGTGGGAGTGCAGTGCTACAGAATGGCTTTTTTCATAATCACGGCTGCGACGCTGTTTGCATGCGTTGTTTCGTTTATTTTGGTGCTGAGGACTAGAAAGTTTTACAAAGGGGATATCTATAGAAAGTTCAGAGTGGAACATGAAACAGAAGAGAATGAAATGCGGATCACCAAAACTGGTGATAGTGTTCTGTTTGAAACAGAAGGGCACGCAACCTTGGGCAGCACCACAAGGGAACAAGATAAGAACAATAGAAAATGA 1800 0.4483 MAVAEFTGTGGVRGMKTLSYHVLTGRWFMLFASLIIMAAAGAAYMFGMYSNEVKTSLGYDQTTLNLLSFFKDVGATVGIISGLVNEITPPWVVLSIGIIMNFFGYFMIFLAVTGHIAKPQVWQMCLYICIGSNSQTFANTGGTVTCVKNFPGSRGNVLGLLKGYVGLSGAIIAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRIFNTVHHPNENKVFYHLLYISLALAGFLMVLIIMQNKLSFTRPEYIAGGVVVFFFLLLPLVVVFREEINQLKAKTQGNLTDSVKVVTEVIPPPNVEQEQEVKSSCLGNVLKPPKRGEDYTILQALFSIDMLILFIATTFGAGGTLTAIDNFGQIGRSLGYPRKSITTCVSLLSIWNYLGRVVAGYASEFFLTKYKLPRPYMLTIVLLLSCIGHILIALGAPNSLYFASVIIGFCLGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVRLTGVLYDKEALKQLKAKGLTREEGKELNCVGVQCYRMAFFIITAATLFACVVSFILVLRTRKFYKGDIYRKFRVEHETEENEMRITKTGDSVLFETEGHATLGSTTREQDKNNRK 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03088 599 Pfam Nodulin-like 26 272 IPR010658 -
Pumo5g03088 599 CDD MFS_Mch1p_like 25 534 - -
Pumo5g03088 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 554 - -
Pumo5g03088 599 Pfam Major Facilitator Superfamily 342 544 IPR011701 GO:0022857|GO:0055085
Pumo5g03088 599 SUPERFAMILY MFS general substrate transporter 26 551 IPR036259 -
Pumo5g03088 599 Gene3D MFS general substrate transporter like domains 332 548 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03088 Pumo-Chr5 79169678 79171477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03088 15 557 Nodulin-like Gene Family AT2G39210 64.695 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03088 - - gmx:100798313 992.645