Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03070 ATGGGAGGGTTTGGAGTACTGGTGCCTATGATGAGGAAACTACAAATCACTTTCTCACGTCGACCAAAAGGGGTGAAGCAGGGCCATTTTGTGGTGATTGCAACCCAAGGGTGGAAGCCAGAGCGATTCTCTATTGAATTGGGGTTTTTGGATCACCCTGACTTTGTGAAGTTGTTAAAGCAAGCTGAAGAAGAGTTCGGGTTCTCTCAGGTAGGAGCACTTGCAATTCCTTGCGAACCAGATGACCTGAAGAGAATCATTGGAAGGAAAAAGAATAGTAACAAGGGTATCATTGCCGGTTAG 303 0.4587 MGGFGVLVPMMRKLQITFSRRPKGVKQGHFVVIATQGWKPERFSIELGFLDHPDFVKLLKQAEEEFGFSQVGALAIPCEPDDLKRIIGRKKNSNKGIIAG 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03070 100 Pfam Auxin responsive protein 19 87 IPR003676 GO:0009733
Pumo5g03070 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03070 Pumo-Chr5 78869484 78869786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03070 24 98 Calmodulin-binding Proteins AT2G24400 37.333 3.11e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03070 - K14488 gmx:100795119 176.022