Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03059 ATGAAGGGAAAGTTTCTAAGAGGGTGTCTTAACAAGTGGAAGAAAATGGGGAGTAGAGTGTTCCATTACAGTTACTGCTGTGAATGGGAACTGTGGTCATCCATGAATGAAGGAGATCACTCCATTCCCAACGATGTGCCAAAGGGTCACTTGGTTGTGTACGTGGGAGAGCACCATAAGAGATATGTGATCAAGATCACGTTGCTCAACCATCCACTCTTCAAGACCTTGCTGGATCAAGCCAAGGATGAGTACGATTTCATTGCAGATTCAAAGCTCTGTATTCCTTGCAGTGAGCATCTTTTCCTCACTGTCCTTCGCTGTGCAAGCTCTCCACACAATGAACGAGTGTTTGTGTGTGTCTGA 366 0.4536 MKGKFLRGCLNKWKKMGSRVFHYSYCCEWELWSSMNEGDHSIPNDVPKGHLVVYVGEHHKRYVIKITLLNHPLFKTLLDQAKDEYDFIADSKLCIPCSEHLFLTVLRCASSPHNERVFVCV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03059 121 Pfam Auxin responsive protein 36 108 IPR003676 GO:0009733
Pumo5g03059 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03059 Pumo-Chr5 78758562 78758987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03059 10 116 Calmodulin-binding Proteins AT4G34750 37.838 2.12e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03059 K14488 - gmx:100793017 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03059 5 78758562 78758987 Pumo5g03059 5 78758562 78758987 ECH
Pumo5g03059 5 78758562 78758987 Pumo3g03238 3 59753589 59753960 PCT