Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03036 ATGAGTGTCATCGACATTCTCACCAGAGTTGATTCCATTTGTAAAAAGTACGACAAATACGACGTCGAAAAGCAAAGGGACTCCAATCTCTCCGCCGACGATGCATTCGCCAAACTCTACGCCTCCGTTGACGCCGATATCGAGGCCTTACTTCAGAAAGCAGAAACTGCTTCGAAGGAGAAAAGTAAGGCATCCACTGTAGCGATCAATGCCGAGATTCGTCGAACCAAGGCTAGGTTGTTGGAGGAGGTTCCAAAGTTGCAGAGATTGGCTATGAAAAAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCGGATAGGATTCAAGCTATCCCAGATGGGACCCCTGCAGCACCCAAACAAACTGGAAGTTGGGCAGCTTCAGCCTCACGTCCTGGAATTAAATTTGATTCAGATGGGAAATTTGATGATGAATACTTCCAACAAACTGAAGAATCAAGTCAATTCAGGCAAGAGTATGAAATGCGTAAAATGAAACAGGATCAAGGTTTGGATATGATCGCAGAAGGATTGGATACTTTGAAAAACATGGCACATGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCTTCCGACCTTAAAAATACCAATGTTAGACTTAGAGACACAGTGAACCAGCTTCGATCCAGTCGAAACTTTTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAATGTGCTAAAGAAATGA 798 0.4248 MSVIDILTRVDSICKKYDKYDVEKQRDSNLSADDAFAKLYASVDADIEALLQKAETASKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLVLALPDRIQAIPDGTPAAPKQTGSWAASASRPGIKFDSDGKFDDEYFQQTEESSQFRQEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLRDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03036 265 SMART tSNARE_6 165 232 IPR000727 -
Pumo5g03036 265 PANTHER SYNTAXIN 44 252 IPR045242 -
Pumo5g03036 265 Gene3D - 170 231 - -
Pumo5g03036 265 MobiDBLite consensus disorder prediction 122 142 - -
Pumo5g03036 265 FunFam Putative syntaxin-71-like 170 231 - -
Pumo5g03036 265 Pfam SNARE domain 207 256 IPR000727 -
Pumo5g03036 265 CDD SNARE_Qc 175 230 - -
Pumo5g03036 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Pumo5g03036 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pumo5g03036 265 Coils Coil 40 60 - -
Pumo5g03036 265 SUPERFAMILY SNARE fusion complex 163 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03036 Pumo-Chr5 78403471 78413554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03036 1 264 SNARE and Associated Proteins AT3G09740 77.444 1.49e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03036 K08506 - gmx:100804155 483.026