Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03031 ATGGCCGATGACTTCGAGTTCGCAGATAAAGTTCCTCCTTCCTTCGATCGCGTGGATTCTGGATCCAAAGGGTTCAATCCAGGCTTAATTGTCCTCCTGGTCGTTGGTGGGTTGCTGTTGACATTCCTCATTGGAAATTATGTGCTCTACACGTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCTGTTTCAAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGTGTCTCTGCACCTGGAGAGTAG 255 0.4706 MADDFEFADKVPPSFDRVDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03031 84 MobiDBLite consensus disorder prediction 60 84 - -
Pumo5g03031 84 PANTHER DNA-BINDING PROTEIN S1FA2 1 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pumo5g03031 84 MobiDBLite consensus disorder prediction 60 74 - -
Pumo5g03031 84 Pfam DNA binding protein S1FA 21 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03031 Pumo-Chr5 78369732 78371743 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pumo5g03031 S1FA 3.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03031 - - gmx:100499820 143.28