Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03017 ATGGAGAGTACCTTAATCTTCTTCCTCTCCTCTCTCACGCTTGCACTCTCCCTCTTACTCCTACTCCATTTGCCTTTTTCCTCTGCTCAGATCATGCAAGGTTTTGTAAGTTTGGATTGTGGAGGTACAGAAAAATTTACTGATGAAATTGGTCTTCACTGGACTCCCGATGACAAACTTCCCTATGGACAAATAAGCACTATATCGGTTGCAAATGAGACACGAAAGCAATACACAACACTGCGACACTTTCCGGCTGATTCCAGGAAATACTGCTACACTCTTGATGTTGTCAGTAGGACGAGGTACCTGTTAAGGGCCACCTTCTTGTACGGAAACTTTGACAATAACAATGTTTATCCAAAATTTGACATTTCTATTGGAGCTACACATTGGTCTACTATTGTTATATCGGATGCTAATAGTATAGAAATGCGAGAGCTTATATTTTTGGCTTCAAGTCCTACAGTTAGCATATGCTTATCGAATGCAACAACTGGACAACCATTTATATCTACGCTTGAACTTCGGCAATTCAATGGCTCAGTTTATTATACACAATTTGAGGATCACTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCAGACTCTGTGAAGAAAGCTAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACCAAAGTACCGATTGATGTTAACAAAGATGAAATGCCACCAGTGACAGTGATGCAGACAGCTGTAGTGGGTACAAATGGATCTCTAACTTACCGGTTGAATTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATTTAGGTCCCGATGAGTCCAGAAAATTCAGGCTAGTACTTCCAGGCCAACCTGATCTTAGCAAGGCTGTTGTAAACATTGAAGAAAATGCTCAAGGGAAATATCGCCTTTATGAACCGGGATTTACCAATATATCCTTACCCTTTGTGCTCTCTTTTAGATTTGGCAAGACATATGATTCTTCTAGGGGACCTCTTCTAAATGCCATGGAGATAAATATGTATCTGGAAAAAAATGACGGTTCTCTAGATGGAGCAGTTATTTCCAGTGTACTTTCACACTACTCTGCAGCAGACTGGGCACAAGAAGGTGGTGATCCATGTCTGCCTGTTCCATGGTCATGGGTCCGATGTAACTCTGATCCACAACCAAGAATAGTTTCAATCTTGTTATCCAATAAAAACTTGACTGGAAATATTCCTTTGGATATCACCAAATTGGTTGGTTTGGTTGAATTATGGCTTGATGGAAATATGTTGACTGGTCCATTACCAGATTTTACAGGATGCATGGACTTAAAGATCATTCATCTTGAAAACAATCAATTGACAGGTGTGCTCCCAACCTCTTTGGCGAGCCTTCCAAGCTTGAGGGAACTGTATGTGCAAAATAATATGTTATCTGGAACAATACCATCAGATCTTCTGAGCAAAGATTTGGTTTTGAACTACTCTGGAAACATTAATCTTCACAGAGAAAGCAAAATAAAGGGCCACATGTATGGTATTATTGGTTCATCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTATTATATCTTGCTTGTTTATGCGTAAAGGCAAGAAAAGATATTATGAGCAAGACCGCATTGATTCTCTCCCTACTCAAAGGCTGGCTTCTTGGAAGAGCGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACAAATAACTTTGCGAAAAAAATTGGTTCTGGTGGTTTTGGAGTTGTATACTATGGGAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAATTTGGTACAGCTACTTGGGTATTGCCGAGATGAAGAGAATAGCATGCTTGTTTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCCCATTAGCGCATGGACGGAGTATCAATTGGATCAAGCGCCTTGAGATTGCAGAAGATGCTGCCAAAGGGATTGAATATCTTCATATGGGTTGTGTTCCTGTCGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTCGACAAGCACATGAGAGCCAAGGTTTCGGATTTCGGTCTTTCAAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATAGTTCGGGGAACAGTAGGATATCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACCGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTGTAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATTGATCCGTTGCTGCAGAATGACTATGACCTTCAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCCCATGGACATATGAGGCCATCAATTTCAGAAGTTCTAAAGGAGATCCAAGATGCAATTTCTATTGAGAGACAGGCAGAAGCATTAAGAGAAGGCAATTCAGATGATATGTCAAAAAATTCTTTTCATTCTTCCATGAACATGGGGTCAATGGATCTAGGTGGAGCTGAGAGTTACCTGTCAATTGATGAATCAATTGCACAGCCTACAGCAAGATAG 2802 0.4008 MESTLIFFLSSLTLALSLLLLLHLPFSSAQIMQGFVSLDCGGTEKFTDEIGLHWTPDDKLPYGQISTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDNNNVYPKFDISIGATHWSTIVISDANSIEMRELIFLASSPTVSICLSNATTGQPFISTLELRQFNGSVYYTQFEDHFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTKVPIDVNKDEMPPVTVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLGPDESRKFRLVLPGQPDLSKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTYDSSRGPLLNAMEINMYLEKNDGSLDGAVISSVLSHYSAADWAQEGGDPCLPVPWSWVRCNSDPQPRIVSILLSNKNLTGNIPLDITKLVGLVELWLDGNMLTGPLPDFTGCMDLKIIHLENNQLTGVLPTSLASLPSLRELYVQNNMLSGTIPSDLLSKDLVLNYSGNINLHRESKIKGHMYGIIGSSVGASVLLLATIISCLFMRKGKKRYYEQDRIDSLPTQRLASWKSDDPAEAAHCFSFSEIENATNNFAKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLAHGRSINWIKRLEIAEDAAKGIEYLHMGCVPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLQNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIERQAEALREGNSDDMSKNSFHSSMNMGSMDLGGAESYLSIDESIAQPTAR 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03017 933 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 681 890 - -
Pumo5g03017 933 Gene3D Phosphorylase Kinase; domain 1 581 680 - -
Pumo5g03017 933 SUPERFAMILY Protein kinase-like (PK-like) 590 875 IPR011009 -
Pumo5g03017 933 Pfam Malectin-like domain 38 367 IPR024788 -
Pumo5g03017 933 PANTHER OS07G0107800 PROTEIN-RELATED 468 881 - -
Pumo5g03017 933 FunFam Leucine-rich repeat receptor-like protein kinase 583 680 - -
Pumo5g03017 933 ProSiteProfiles Protein kinase domain profile. 605 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03017 933 SMART serkin_6 605 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03017 933 CDD STKc_IRAK 611 878 - -
Pumo5g03017 933 Gene3D Transferase(Phosphotransferase) domain 1 681 904 - -
Pumo5g03017 933 Gene3D Ribonuclease Inhibitor 383 533 IPR032675 -
Pumo5g03017 933 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Pumo5g03017 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Pumo5g03017 933 Pfam Protein tyrosine and serine/threonine kinase 607 807 IPR001245 GO:0004672|GO:0006468
Pumo5g03017 933 SUPERFAMILY L domain-like 406 521 - -
Pumo5g03017 933 FunFam Leucine-rich repeat protein kinase family protein 380 532 - -
Pumo5g03017 933 Pfam Leucine rich repeat 462 502 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03017 Pumo-Chr5 78193548 78201073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03017 27 715 Receptor kinase-like Gene Family AT2G37050 70.301 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo5g03017 Malectin_like 6.8e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03017 - - gmx:100784017 1775.37