Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03014 ATGGCAATGGCGCCCTCAACTCCCACTAGCGGGTCTGGCAAGAAGGTTAGAAAGCCTTATACTATTACCAAGTCTAGGGAGAGCTGGTCTGAGGAAGAGCACGACAAGTTTCTCGAAGCTCTTCAACTAAAAGGTGCACAACTTAACAAATTCGTTGGTCATCTTGCTGGTTCAGTTCTTTTTTTGGCCTACCTAATATATATATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTTGGTTCAAAAACAGTTATTCAGATTAGAAGTCATGCCCAGAAGTACTTCTTGAAAGTTCAAAAGAACGGGACAGTAGCACATGTGCCTCCTCCTCGGCCTAAACGCAAAGCTTCTCATCCTTATCCACAAAAGGCATCCAAAAATGTTTCTGGGTTGGCAGTTTTGGTGCCATTGCCAGCTTCCATGGCTTATGTTTCTTCCACTAGTACCCTTCCACCTGGGTATCTCACATGGGATGAAAATTCCTTGCTCATGAATGCTGGATCCAGCCAATCAGTGCCATGTGAGAATGAACTCACCAATCTTCATGGAAATGAAGCTGATATTGGATCAAAGGGGATAACACGAATTGGTCACAGCAGTCTCAGTGGTGTTGGGAACTCTTCTAGAAAACTGCCTACTTCTGAGATGACAAAACAAGGGAAACAGGCTCAGGTGATTCATGGCTTGCCAGATTTTGCTGAAGTTTACAGTTTCATTGGAAGTGTTTTCGATCCAGATTCAGAAGGCCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGCTGTTAATGAAAAACCTCACTATCAACTTGTCTAGTCCTGACTTTGAGCCCATTAGGAAGGTCATGTCATCATACGATGTCAATACAAATACAGTAGGAGTTACCACAGGAATTGACGTGAAGAAGCAGACAAATGATCTATCATGTCAAACAGCTTGA 960 0.4219 MAMAPSTPTSGSGKKVRKPYTITKSRESWSEEEHDKFLEALQLKGAQLNKFVGHLAGSVLFLAYLIYIFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKASHPYPQKASKNVSGLAVLVPLPASMAYVSSTSTLPPGYLTWDENSLLMNAGSSQSVPCENELTNLHGNEADIGSKGITRIGHSSLSGVGNSSRKLPTSEMTKQGKQAQVIHGLPDFAEVYSFIGSVFDPDSEGHVQKLKEMDPINFETVLLLMKNLTINLSSPDFEPIRKVMSSYDVNTNTVGVTTGIDVKKQTNDLSCQTA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03014 319 SUPERFAMILY Homeodomain-like 20 101 IPR009057 -
Pumo5g03014 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 100 IPR017930 -
Pumo5g03014 319 Gene3D - 29 101 - -
Pumo5g03014 319 Pfam Myb-like DNA-binding domain 26 96 IPR001005 -
Pumo5g03014 319 CDD SANT 28 96 IPR001005 -
Pumo5g03014 319 SMART sant 25 98 IPR001005 -
Pumo5g03014 319 PANTHER SWI/SNF COMPLEX-RELATED 12 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03014 Pumo-Chr5 78136878 78140749 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo5g03014 Myb_DNA-binding 5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03014 - - gmx:100783482 503.442