Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03006 ATGGCAACTGCCGGCGTGCAAGAAGTTCGTGTTCCCCCGCTAACTTCCACCTCCGAACCACCTTCTCTCTTTGACGGAACCACCAGGTTGTACATCAGTTATCTTTGTCCCTATGCGCAGCGTGCTTGGATCACTCGGAACTACAAGGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAACAAGGTGCCATCATTGGAGCACAATGGAAAGGTCTTGGGAGAAAGTCTCGATTTGGTCAAATACGTAGATGCCAACTTCGAAGGGCCATCTCTAGTTCCCAGTGATGCTGCCAAGAAAGAGTTTGGTGAGCAGTTGATTTCCCATGTTGATACATTTACCAAAGAGCTCTATTCTGCATTGAAAGGAGATCCAATACAACAAGCCAGCCCTGCCTTTGATTACTTGGAGAATGCTCTTGGTAAATTTGACGATGGGCCATTCTTTCTTGGTGAATTTAGCTGGGTGGATATTGCCTATGTTCCATTTGTTGAAAGATTCCAGCTCGTCTTTTCTGATGTGTTCAAGCATGATATAACTGAAGGAAGGCCTAAACTTGCAGCATGGATTGAGGAAGTGAACAAGATTAGTGCTTATACCCAGACAAGAGCTGATCCTAAGGAAATCGTTGATCTTTTTAAGAAACGTTTTCTGGCTCAGTAG 711 0.4459 MATAGVQEVRVPPLTSTSEPPSLFDGTTRLYISYLCPYAQRAWITRNYKGLQDKIKLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYVDANFEGPSLVPSDAAKKEFGEQLISHVDTFTKELYSALKGDPIQQASPAFDYLENALGKFDDGPFFLGEFSWVDIAYVPFVERFQLVFSDVFKHDITEGRPKLAAWIEEVNKISAYTQTRADPKEIVDLFKKRFLAQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03006 236 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Pumo5g03006 236 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g03006 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 233 IPR044629 GO:0004364
Pumo5g03006 236 SFLD Main (cytGST) 29 210 - -
Pumo5g03006 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Pumo5g03006 236 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Pumo5g03006 236 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Pumo5g03006 236 Gene3D - 105 236 - -
Pumo5g03006 236 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Pumo5g03006 236 CDD GST_C_Lambda 112 230 - -
Pumo5g03006 236 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Pumo5g03006 236 Gene3D Glutaredoxin 1 104 - -
Pumo5g03006 236 FunFam Lambda class glutathione S-transferase 105 236 - -
Pumo5g03006 236 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03006 Pumo-Chr5 78081913 78085721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03006 8 234 Glutathione S-transferase Gene Family AT5G02790 69.604 1.14e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03006 K00799 - gmx:100793025 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03006 5 78081913 78085721 Pumo3g03334 3 61203569 61206376 ECH
Pumo5g03006 5 78081913 78085721 Pumo5g03006 5 78081913 78085721 ECH
Pumo5g03006 5 78081913 78085721 Pumo3g03334 3 61203569 61206376 PCT