Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03005 ATGGCAGCTGCAGGTGTTAGGATTCCACCCTTGACATCTACCTCCAACCCACCTCCCCTTTTTGATGGAACTACAAGATTTTGTTTCAGACTGTACACCAGTTATACATCCCCATATGCACAACGTGTATGGATCGCTATGAATTATAAGGGACTACAAGACAAGATCGAACTGGTTCCTATCGATCTTCGGGACATGCCTGCGTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCCTTGGAGCACAATGGCAAGGTCTTGGGAGAAAGTCTTGATTTGATCAAATATGTTGATGCCAACTTCGAAGGGCCATCTCTAGTTCCCACTGACCCTGCAAAGAGAGAATTTGGGGAGCAGTTGATATCTCACATTGATTCTTTGATGAAGGACTTCTACGCTTCGTTCAAAGGAGAAGATCCTGTGCAGCAGGCTGGTGCTTCTTTTGATTATTTGGAGAATGCTCTCTGGAAATTTGATGACGGACCCTTTTTTCTTGGCCAATTTAGTTTGGTGGATGCTGCCTATGCTCCATTTCTTGAAAGGTTACAGAATACCTTTTCTGAGGTGTATAAGAATGACATCACATCTGGGAGGCCTAAACTAGCCACATATATTGAGGAGCTGAATAAAATTGATGCTTATAAGACGACCAAGGTTGATCCCCAGGAGTTTGTTGAAGTTTTCAAAAAATGGCTTTTGGTCCATCAATGA 720 0.4306 MAAAGVRIPPLTSTSNPPPLFDGTTRFCFRLYTSYTSPYAQRVWIAMNYKGLQDKIELVPIDLRDMPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGPSLVPTDPAKREFGEQLISHIDSLMKDFYASFKGEDPVQQAGASFDYLENALWKFDDGPFFLGQFSLVDAAYAPFLERLQNTFSEVYKNDITSGRPKLATYIEELNKIDAYKTTKVDPQEFVEVFKKWLLVHQ 239
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03005 239 Gene3D Glutaredoxin 2 105 - -
Pumo5g03005 239 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Pumo5g03005 239 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 235 IPR044629 GO:0004364
Pumo5g03005 239 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Pumo5g03005 239 FunFam Glutathione S-transferase L2, chloroplastic 1 105 - -
Pumo5g03005 239 Gene3D - 106 239 - -
Pumo5g03005 239 SFLD Glutathione Transferase (cytosolic) 30 212 IPR040079 -
Pumo5g03005 239 CDD GST_N_family 30 101 - -
Pumo5g03005 239 FunFam Lambda class glutathione S-transferase 106 238 - -
Pumo5g03005 239 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Pumo5g03005 239 Pfam Glutathione S-transferase, C-terminal domain 144 209 - -
Pumo5g03005 239 CDD GST_C_Lambda 113 232 - -
Pumo5g03005 239 SUPERFAMILY Thioredoxin-like 29 109 IPR036249 -
Pumo5g03005 239 SFLD Main (cytGST) 30 212 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo5g03005 Pumo-Chr5 78078388 78080550 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03005 7 233 Glutathione S-transferase Gene Family AT5G02790 65.198 5.73e-107 306
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03005 K00799 - gmx:100793025 348.206