Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03004 ATGAAGGGGATGAAAAGGGGGATGTTGGGGTGTGTGTTAGAAGTTCGGCGTCCTGCATTAACTTCCATCTCCGAACCACTTCCATTTTTCGATGGAACCACAAGGTTGTACATTTGCTATCTGTGCCCTTTTGCACAACGCGCATGGATAACTAGGAATTGTAAGGGACTGCAAGACAAGATCGAATTGGTTCCTATTGACCTTAAAAACAGACCTTTTTGGTATAAGGAGAAAGTTTACCCTACGAATAAGGTGCCGTCGTTGGAGCACAATGGCAAGGTTTTAGGAGAAAGTCTTGATTTGATAAGATATATAGATGCCAACTTTGAAGGGCCACCTCTATTTCCCACTGATCCTGCCAAGAGAGAATTTGGTGAGCAGTTGATATCCCATGTTGATACGTTCACCAGTGGCATATACCCTACATTTAAAGAAGATCCTGTACAACAAACCAGTGCTGCCTTTGATTACGTGGAGAGTGCTCTTGGTAAATTTGATGATGGACCGTTCTTCCTAGGCCAATTTAGTTTGGCGGATATTGCCTACCTTTCATTTCTTGAAAGGTTCCAAATGGTGTTCTCTGAAATTTTTAAGCACGACATCACAGCAGGAAGACCCAAACTAGCCACATGGATTCAGGAGGCGAATAAGATTGATGGTTATAAGCAGACAAAAGTTGACAGGGAGGAATATCTGGAAGCTTTCAAGAAAAAATTTATGTAG 723 0.4219 MKGMKRGMLGCVLEVRRPALTSISEPLPFFDGTTRLYICYLCPFAQRAWITRNCKGLQDKIELVPIDLKNRPFWYKEKVYPTNKVPSLEHNGKVLGESLDLIRYIDANFEGPPLFPTDPAKREFGEQLISHVDTFTSGIYPTFKEDPVQQTSAAFDYVESALGKFDDGPFFLGQFSLADIAYLSFLERFQMVFSEIFKHDITAGRPKLATWIQEANKIDGYKQTKVDREEYLEAFKKKFM 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03004 240 Pfam Glutathione S-transferase, C-terminal domain 148 213 - -
Pumo5g03004 240 SUPERFAMILY Thioredoxin-like 27 114 IPR036249 -
Pumo5g03004 240 FunFam Glutathione S-transferase L2, chloroplastic 8 110 - -
Pumo5g03004 240 SUPERFAMILY GST C-terminal domain-like 109 238 IPR036282 -
Pumo5g03004 240 SFLD Main (cytGST) 35 216 - -
Pumo5g03004 240 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 32 113 IPR004045 -
Pumo5g03004 240 Gene3D Glutaredoxin 9 110 - -
Pumo5g03004 240 Gene3D - 111 240 - -
Pumo5g03004 240 PANTHER GLUTATHIONE S-TRANSFERASE L1 12 239 IPR044629 GO:0004364
Pumo5g03004 240 Pfam Glutathione S-transferase, N-terminal domain 36 113 IPR004045 -
Pumo5g03004 240 CDD GST_C_Lambda 118 236 - -
Pumo5g03004 240 FunFam Lambda class glutathione S-transferase 111 240 - -
Pumo5g03004 240 SFLD Glutathione Transferase (cytosolic) 35 216 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03004 Pumo-Chr5 78067070 78071630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03004 17 240 Glutathione S-transferase Gene Family AT5G02790 65.778 5.35e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03004 K00799 - gmx:100816962 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03004 5 78067070 78071630 Pumo3g03335 3 61207236 61210228 PCT