Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02984 ATGAGAAACTTGTGTTTTAACCCCAAGACGCCGTCGTTTGCGTTGGCCCGCAGTTCTCCTTCTTCACCACTATCCTTAACCTCAAGCCCAACGCCTCCGAGGCTGAGCTTTTCCGAACCTAGCAGCTTCGACGAAGATAGCTTCATCGACGAAGCTGGGGCACTGATACTGAAATGGGACCCTGACACTTCCGCTTACGCCAAAGTCACTTCCCTCTTCTACGAGGACAAAATCGAAGCCAAACAGTACATTAACTGCGTTCACCAGCTTCAGAAAACCATGCATTCCTTGCTCTCACAGAACCCTTCCTCCGAGAAACTCATCCTCGCTCATAACCTAATGCAGATGGCCATGAAGAGGCTCAAGAAAGAGTTCTACCAGATTTTATCCATGAACCGCGCTCACCTTGATCCCGAATCTATCTCCGCCAGATCCTCTCGCACCTCCGCCAATTCCAGCGCCTCCGATTGCGACGACGACTTCGCGGTGGAGGACGACGATATTCGCGCCGCCGGCGACTCTATCTCTGAAGTCGAGCAGGTTTCGTCCGGCGCCATGGCGGATCTGAAATTAATCGCCGACTGCATGGTCTCTTCCGGTTATGCCAAAGAATGCCTCGACGTTTACAAAATCATCCGAAAATCCATCATCGACGAAGGAATCTACCGCCTCGGCGTGGAGAAACTGAGCTCCTCGCGCGCTAACAAGATGGTTTGGGAAGTGCTTGATTTGAAGATCAAGAGTTGGTTAGAGGCGATACGGATTTCCGTTAGAACGCTCTTCAACGGAGAGAGAATCCTCTGCGACCACGTCTTCAGTTACTCAGATTCCGTCAGAGAATCATGCTTCGCAGAGATTTCAAGAGACGGTGCCTCTCTTCTTCTTGGATTCCCCGAACTCGTAGCCAAAACAAAGAAATCATCGCCGGAGAAGCTGTTCCGCGTGCTCGATATGCACGCTGTGGTTTCCGAATTGTGGCCGGAGATCGAGTCTATCTTCTCCTCCGATTACAACTCCGGAGTTCGTTCTCAAGTCCTCGCTTCGCTTCAACGACTCACTGAATCCGCGCAAATCTTGCTTGCGGAGTTCGAGTCCTCGATCCAGAAAGATTCTTCCAAGTCAGCGGTGAACGGCGGTGGAGTGCACTTGCTCACGATTCAGACGATGAATTACCTCGCAGTCCTCGCCGATTACGTCAACGTGCTCTCTGACATATTCCCGCGCGACTGGCTTCCGCCGCCGAAGTCGTCGTCGCTGCCGGAATCTTATTTATACAGTCCAGAGTCTGATTACTCGGCGTCGACGCCGGCGCTGACGGTGCGTTTTGCTTGGCTTATTCTCGTCCTCCTTTGCAAGCTCGACGGCAAAGCAAAGCATTGCAAGGACGTTTCGCTGTCTTACCTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTCGCGACGATTGGATCACGAAGCACGAGGCCAAAGCGAAGAGGTTTGTTGCGAACTACGAGAAGGTGGCGTGGGGAGAAGTAGTTTCGTCGTTGCCGGAAAATCCAGCCTCGGCGGAGGCAAGGGCGGTGTTCGAGAATTTCAACCACAAATTCGAGGAAGCGTATCGGAAACAGAACTCTTTCGTCGTAGCAGACCGAGAATTACGAGACGAAATAAAAGGTTCGATTGCGAGAAGTATAGTGCCGAGATATCGCGAGTGGTATAATGTTGTTCTTGCTACGGTGGGATCAGTGAGGGACTTGACGGCGACGGAGTACGTCACGTTTACCCCTGAGGATATTGAAAATTACCTCGTTAACCTCTTCTTTTTTGGAACATCTTCCAGCGCTGTATCGTCCTCGTCGGTAACGTCGTCCCCTCTCCGGCGTTGGAGTTAA 1908 0.5194 MRNLCFNPKTPSFALARSSPSSPLSLTSSPTPPRLSFSEPSSFDEDSFIDEAGALILKWDPDTSAYAKVTSLFYEDKIEAKQYINCVHQLQKTMHSLLSQNPSSEKLILAHNLMQMAMKRLKKEFYQILSMNRAHLDPESISARSSRTSANSSASDCDDDFAVEDDDIRAAGDSISEVEQVSSGAMADLKLIADCMVSSGYAKECLDVYKIIRKSIIDEGIYRLGVEKLSSSRANKMVWEVLDLKIKSWLEAIRISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLLGFPELVAKTKKSSPEKLFRVLDMHAVVSELWPEIESIFSSDYNSGVRSQVLASLQRLTESAQILLAEFESSIQKDSSKSAVNGGGVHLLTIQTMNYLAVLADYVNVLSDIFPRDWLPPPKSSSLPESYLYSPESDYSASTPALTVRFAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLRDDWITKHEAKAKRFVANYEKVAWGEVVSSLPENPASAEARAVFENFNHKFEEAYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNVVLATVGSVRDLTATEYVTFTPEDIENYLVNLFFFGTSSSAVSSSSVTSSPLRRWS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02984 635 Pfam Exo70 exocyst complex subunit 247 608 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo5g02984 635 MobiDBLite consensus disorder prediction 17 42 - -
Pumo5g02984 635 SUPERFAMILY Cullin repeat-like 56 612 IPR016159 -
Pumo5g02984 635 Gene3D Exocyst complex component Exo70 65 620 - -
Pumo5g02984 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 612 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02984 Pumo-Chr5 77782566 77784552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02984 49 612 EXO70 exocyst subunit family AT3G09520 56.348 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02984 K07195 - gmx:100810548 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02984 5 77782566 77784552 Pumo3g03457 3 68404057 68408216 PCT
Pumo3g02599 3 39200139 39202100 Pumo5g02984 5 77782566 77784552 PCT