Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02965 ATGACGTCTTTCTTGAAGCCTGAGAATGCTCTCAAAAGGGCAGAAGAATTAATCAATGTTGGGCAGAAGCAGGATGCTTTGCAGACTCTTCATGACCTCATTACTTCAAAGAGATACAGAGCATGGCAGAAGACACTTGAAAGGATTATGTTCAAGTATGTTGAACTGTGTGTAGACATGCGCAAAGGACGGTTTGCGAAGGATGGGCTCATTCAGTATAGGATTATATGTCAGCAAGTGAACGTTAGTTCCCTTGAGGAGGTGATCAAGCATTTCATGCACCTGTCAACTGAGAAAGCTGAACAAGCTCGTAGCCAGGCACAGGCATTAGAAGAAGCCCTTGATGTTGATGATTTAGAGGCAGATAAAAGGCCAGAGGATTTAATGTTAAGCTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGATCGGGAGCTTGTCACCCCATGGTTTAAATTTCTCTGGGAGACATACCGGACAGTGCTTGAAATATTGCGGAACAACTCAAAACTGGAAGCCTTATATGCTATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATATAAACGAACAACAGAGTTCCGCAGACTGTGCGAAATCATAAGAAACCATTTGGCTAATCTCAATAAATACCGTGACCAACGAGACCGACCTGATCTCTCAGCACCTGAAAGCTTACAGCTGTATCTTGATACAAGATTTGAGCAGCTGAAGATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGACTGATGTGCTTGGTCAAGAAAACGCCCAAGCCATCTTTGATGGTTGTTTACTATGTGAAGCTGACAGAAATATTTTGGATATCATCAAGTCATCTGTATCATGCATATGCATGGTTCAAGCTCTTTTTATTACAAAAAAGCTTCAATAAGAATCTGAGTCAAAAGGATTTGCAATTAATAGCTTCATCTGTTGTTCTGGCCGCACTTTCAGTGCCTCCTCATGATCGCACCCATGGTGCATCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGGATGGCTAATCTCATTGGCTTTAACCTTGAAACCAAACCTGAAAGCAGAGAAATGCTCTCAAGGTCATCACTTCTTGCTGAACTGGCATCGAAGGGTGTGATGTCTTGTGTAACTCAGGAAGTGAAGGACATTTACCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCATTAAAAGCGTTGCCCTTGATAACTAAAATCTCAAAGTTAGGGGGCAAGCTTTCTACTGCATCATCTGTTCCAGAAGTGCAATTGTCTCAGTATGTACCAGCACTGGAAAGACTAGCTACCATGAGGTTGCTGCAGCAGGTGTCTAATGTGTACCAGACAATGAAGATTGAGACCTTATCTGGGATGATCCCTTTCTTTGATTTTTCTGTAGTGGAAAAGATTTCTGTAGATGCTGTTAAGCAGAAGTTTGTATCGATGAAAGTTGACCACATGAAAAATGTTGTGATTTTTAGCAAAACGAGTCTCGAGTCTGATGGCTTAAGGGATCACTTGGCCAATTTTGCCGAACAATTAAATAAGGCAAGACAAATGATTTATCCTCCTGATAAGAAACCATCAAAGCTTGGAGCTTTACTTCCAACTTTGACTGAGGTCGTGGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCGATTATTGAGAAGAGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGGGAGGAGGAGTCGAAGAGGCTAAGACTGCAGAAAATAACTGAAGAAGCGGAACAAAGACGGCTTGCCACTGAGTATGAGCAGAGGAAAAATCAGAGGATCCTCAGGGAGATAGAGGAGAGAGAAATTGAAGAAGCTCAAGCTTTACTCCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGAAAAAAACCAATTATAGAGGGGGACAAAATGACAAAGCAGACCTTGATGGAGTTGACATTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAACTGCAAAAGTTAGCAAAAACCATGGATTATTTGGAAAGAGCAAAAAGAGAAGAGGCTGCTCCCCTTATTGAAGCTGCATATCAACAGCGTCTAGTGGAAGAGAGACTTCTTCATGAGCATGAGCAGCAGCAAGAGGTTGAACTGAGCAAACAGAGGCATGAGGGTGATCTCAAGGAGAAGGAGAGGCTTGCTCGAATGATGGGCAATAAGGAGATATATCAGGTGAGAGTTGTTAGTCACCGCCAAGCAGAGTTTAACAGATTGAGAAGAGAGCGGGAAGAGCGAATCTCTATGATTTTACAGTCTAGGAGACAGGAGAGGGAGAAAATGAGGAAGTTGAAGTATTATCTCAAGTTAGAAGAAGAGAAACAACAAAAATTGCGTGAGGAGGAGGAAGCTCGGAAACGTGAAGAGGCTGAAAGGAGAAAGAAAGAAGAGGCTGAACGCTTGCAAAAATTGGAGGAGATAGCTGAAAAGCAGAGGCAGAGAGAGAGGGAACTTGAAGAAAAAGAGAAACAAAGGAGAGAAGCATTGTTGGGTAGAGCTGCTGAACCAGCTCCTCCTGCCCGTCCATTGGAATCGGGATCTGCTGCTGCCCCTGCTGCAGCTGCTGCTGCCGCTGCTCCAACACCAGGGAAATACGTCCCTAAGTTCAGGCGAGAGAGAACTGAAAGCACAGGAGCTGCGCCTCCTCCAGAAACAGATCGCTGGAGTAACAGTAGGCCGGATGGTGACAGGTGGCGTAGTGATGATCGTAGATCTGGGTTTGGTTCTGGTGGAGGTTCAAGGTCATCTTCTACTTGGTCATCTTCCAGGAATGCCCGTTGA 2868 0.4379 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDIYHLLEHEFHPSDLALKALPLITKISKLGGKLSTASSVPEVQLSQYVPALERLATMRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVIFSKTSLESDGLRDHLANFAEQLNKARQMIYPPDKKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEHEQQQEVELSKQRHEGDLKEKERLARMMGNKEIYQVRVVSHRQAEFNRLRREREERISMILQSRRQEREKMRKLKYYLKLEEEKQQKLREEEEARKREEAERRKKEEAERLQKLEEIAEKQRQRERELEEKEKQRREALLGRAAEPAPPARPLESGSAAAPAAAAAAAAPTPGKYVPKFRRERTESTGAAPPPETDRWSNSRPDGDRWRSDDRRSGFGSGGGSRSSSTWSSSRNAR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02965 955 Coils Coil 615 649 - -
Pumo5g02965 955 Coils Coil 796 857 - -
Pumo5g02965 955 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Pumo5g02965 955 MobiDBLite consensus disorder prediction 803 955 - -
Pumo5g02965 955 MobiDBLite consensus disorder prediction 803 859 - -
Pumo5g02965 955 MobiDBLite consensus disorder prediction 938 955 - -
Pumo5g02965 955 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 945 IPR027512 GO:0005852
Pumo5g02965 955 Pfam PCI domain 373 510 IPR000717 -
Pumo5g02965 955 Gene3D - 269 342 - -
Pumo5g02965 955 Gene3D - 352 509 - -
Pumo5g02965 955 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Pumo5g02965 955 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Pumo5g02965 955 MobiDBLite consensus disorder prediction 918 933 - -
Pumo5g02965 955 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Pumo5g02965 955 Coils Coil 561 602 - -
Pumo5g02965 955 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pumo5g02965 955 Coils Coil 667 697 - -
Pumo5g02965 955 Coils Coil 93 120 - -
Pumo5g02965 955 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 955 IPR027512 GO:0005852
Pumo5g02965 955 Gene3D UVR domain 217 268 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02965 1 952 Eukaryotic Initiation Factors Gene Family AT4G11420 72.579 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02965 K03254 - gmx:100782598 1451.8