Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02960 ATGACTTTCAACGCGAGCGCCATCAGAACGGCGTCGGATGGAGCCTGGCAAGGTGATAATCCCCTGAACCACTCTCTTCCTTTGTTGATCGTTCAAACCATCCTCGTTGTCTTCGTGAGCCGCACCCTCGTCTTTCTCCTCAAACCCTTTCGTCAACCCAAAGTTGTCGCCGAGATTATTGGTGGAATTTTGCTGGGACCTTCTGCTCTTGGGCGCAACAAAAAAATCATGCACATAGTGTTCCCATCATGGAGCATCACGATGCTGGAATCAGTGGCAAGCTTTGGGCTCTTATTCTATCTATTTCTGGTGGGCCTAGAGCTGGACTTTCGCACCATTCGCCGGAGCGGCAAGCAAGCCTTGAACATCGCGGTGGCCGGAATAACCCTCCCCTTCATCTTCGCAGTGGGAGTGACCTTCCTGCTCCGGAGAGCCATCCGCTCCGAAAGCAATAACGTTGGTTACGTTCAGCACTTCGTGTTCTTGGGGGTTTCGCTGTCCATCACAGCTTTCCCTGTGCTCGCGCGCATCTTAGCGGAGCTCAAGCTGTTGACGACACGTGTGGGAGAAACGGCCATGGCAGCTGCAGCCTTCAACGACGTCGCTGCCTGGGTTTTGTTGGCCTTGGCAGTGGCTTTGGCTGATCAGGGACACAAAACCAGTAGTCTGTTGACATCAATATGGGTGCTCTTCTCAGGAGTGGCATTTGTTGGCGCGATGATGATCCTAGTTCGACCGGTGATGAACCGTGTTGGTCGCAAGTGTTCTCGCGAACATGACGAGTTACCCGAAATGTACATATGTTTAACCCTTGCGGGGGTAATGTTATCGGGGTTCGTGACAGACATGATAGGGTTACATTCAATTTTCGGGGGATTTGTTTTTGGGCTAACGATACCGAAGGGAGGTGAATTTGCAAGCAGAATGACGAGGAGGATTGAGGACTTTGTGTCCACGTTGTTGCTTCCGTTGTACTTTGCTTCAAGTGGTTTGAAAACTGATGTGACTAAGTTACGGAGTGTGGTGGATTGGGGGCTTCTTTTGCTGGTTACGTCTACAGCGTGTGCGGGGAAGATTTTGGGAACGTTTGTGGTGGCGGTGATGTGCATGGTGCCGGTGAGGGAATCCTTGACGCTTGGAGTCTTGATGAACACCAAAGGCTTGGTGGAGCTAATCGTTCTTAATATTGGCAGAGAGAAGAAGGTCCTCAATGACGAGATGTTTACCATCCTTGTGCTCATGGCTCTCTTCACCACCTTCATTACAACTCCAATAGTCCTTGCCATATATAAACCCTCTCATGTTGTAAACTCCGGATCACAAAAACCGTCGCGGCTGACAGATTTGCAAGAGAAGCTTCGCATTCTTGCTTGCATCCATGGACCTAGCAACATACCCTCACTAATCAACTTCATTGAATCAATTCGGGCCACCAACATGTCGCGGCTCAAACTGTACGTAATGCAACTTACCGAACTCACTGATAGCTCGTCCTCCATCTTGATGGTTCAACGCAGTCGAAAGAATGGTTTTCCTTTTATCAACCGAATCAAAAGGGGAGCAATGCATGAGCAAATTGCCACAGCATTCCAGGCTTATGGTGAAGTGGGTCAAGTCACTGTGCATCATTTGACATCCATCTCTCTATTGTCAACAATGCACGAGGACATATGCCACGTTGCAGAAAAGAAAGGTGTGGCAATGATCGTATTGCCCTTCCACAAAAGGTGGGGAGGGGAAGATGAAGAGGTCACAGAAGACTTGGGTCAGGGTTGGAGGGAAGTCAATCAGAGGGTGCTTCAAAATGCACCCTGCTCTGTTGCAGTGCTAGTCAACCGTTGGGGTGACAAAAGGTACGAGCAAGAACCTGAGACCAGTGTTGCTGCAAGGAAAAGGGTGTGCATAATTTTCATTGGTGGACCACATGATCGCAAGGTTTTGGAGTTAGGTAGCAGAATGGCAGAGCATCCAGCAATTAACATGCTTTTAGTGAGATTCACTTCATACACAGAAGCTGGGGACGAGGGACCCAAACATAATTCACCAACACCCACCACCAACTGGGAAAAAGAAAAGGAGTTGGATGAGGAGGCAGTAAACGAGTTCAAGGCAAAATGGCAGGAGTCAGTGGAGTACATTGAAAAGAACGCAACCAACATAACAGAGGAGGTGTTATTAATTGGGAAAGCTAAGGATTACGACCTAGTAATTGTGGGTCAGCGACAACAGCTTGAGACAACCATGTTGACAAACATAGATTTTCGTCCCGAGCATGCGGAGCTGGGGCCCATTGGAGATCTCTTAGTCTCTTCGGGTAACCACATTACCAGTTCATTGCTCGTTATACAGGACCGATATTTAATAAATTCAACCGAAAGTACTCTCGTTAAGACAGCAAGGGCCAAGAGTACTGTGATTAGCGATACTACCGAAGAACTTTAA 2442 0.4844 MTFNASAIRTASDGAWQGDNPLNHSLPLLIVQTILVVFVSRTLVFLLKPFRQPKVVAEIIGGILLGPSALGRNKKIMHIVFPSWSITMLESVASFGLLFYLFLVGLELDFRTIRRSGKQALNIAVAGITLPFIFAVGVTFLLRRAIRSESNNVGYVQHFVFLGVSLSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWVLLALAVALADQGHKTSSLLTSIWVLFSGVAFVGAMMILVRPVMNRVGRKCSREHDELPEMYICLTLAGVMLSGFVTDMIGLHSIFGGFVFGLTIPKGGEFASRMTRRIEDFVSTLLLPLYFASSGLKTDVTKLRSVVDWGLLLLVTSTACAGKILGTFVVAVMCMVPVRESLTLGVLMNTKGLVELIVLNIGREKKVLNDEMFTILVLMALFTTFITTPIVLAIYKPSHVVNSGSQKPSRLTDLQEKLRILACIHGPSNIPSLINFIESIRATNMSRLKLYVMQLTELTDSSSSILMVQRSRKNGFPFINRIKRGAMHEQIATAFQAYGEVGQVTVHHLTSISLLSTMHEDICHVAEKKGVAMIVLPFHKRWGGEDEEVTEDLGQGWREVNQRVLQNAPCSVAVLVNRWGDKRYEQEPETSVAARKRVCIIFIGGPHDRKVLELGSRMAEHPAINMLLVRFTSYTEAGDEGPKHNSPTPTTNWEKEKELDEEAVNEFKAKWQESVEYIEKNATNITEEVLLIGKAKDYDLVIVGQRQQLETTMLTNIDFRPEHAELGPIGDLLVSSGNHITSSLLVIQDRYLINSTESTLVKTARAKSTVISDTTEEL 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02960 813 Gene3D - 28 435 IPR038770 -
Pumo5g02960 813 MobiDBLite consensus disorder prediction 671 693 - -
Pumo5g02960 813 PANTHER CATION/H + ANTIPORTER 11 783 - -
Pumo5g02960 813 FunFam Cation/H(+) antiporter 15 28 436 - -
Pumo5g02960 813 Gene3D - 486 749 - -
Pumo5g02960 813 Pfam Sodium/hydrogen exchanger family 34 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02960 Pumo-Chr5 77343577 77351142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02960 77 810 Antiporter Super Family AT3G53720 57.461 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02960 K26731 - gmx:100799165 1409.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02960 5 77343577 77351142 Pumo5g02960 5 77343577 77351142 ECH