Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02959 ATGCCGTTGAACATAACATCCATCAAGACATCCTCAAATGGAGTGTGGCAAGGTGACAATCCTCTGGATTACGCCTTCCCACTCCTAATAATCCAAATCATCTTGGTCCTTGCCGTTAGCCGCTCCCTCGCTCTCCTCCTCAAACCTCTCCGACAACCCAAAGTTATCGCTGAGATTATTGGTGGAGTTTTGCTGGGGCCATCCGCGTTGGGAAGAAACAAAAGTTATTTGCACCGCATATTCCCTTCATGGAGCATGCCCACGCTGGAATCTGTGGCCAGCATAGGTCTTCTTTTTTTCCTCTTCCTGGTAGGTCTGGAGCTGGATCTCCACTCCATTCGCCGGAGCGGGCGTAGAGCACTCAGCATCGCCGCCGTCGGGATCTCTCTTCCGTTCATCTGCGGCATCGGCGTCGCCATCATCCTCCGCAAAACCGTCGACGGCGCCGACAAAGCTGGCTTCGCGCAGTTCCTCGTCTTCATGGGGGTGGCGATTTCCATCACCGCATTCCCTGTGCTCGCGCGCATCCTGGCGGAGCTCAAGCTCCTCACCACGCGCGTGGGGGAGACCGCCATGGCCGCGGCGGCGTTCAACGACGTGGCCGCGTGGATCCTACTCGCCCTCGCGGTGGCGCTCGCCGGGGACGGCGGTGGACACAAGAGCCCCCTGGTCTCCGTGTGGGTTCTCCTCTCCGGCCTCGGTTTCGTTGTCTTCATGATGGTCGTTATCCGACCCGCGATGAAGGTTGTCTCTGGCAGAGGCGAAAACGACGCCGTTGACGAGGTTTATATCTGCTTAACGTTGGCGGGGGTGTTGGTGTGCGGATTCATAACGGACATGATCGGGATCCATTCTATATTCGGGGCGTTCGTGTTCGGGTTAACGGTTCCAAAGGATGGGAACTTTGCGAAGAGATTGATGGAGAGGATCGAGGATTTTGTTTTGGGTTTGTTACTACCGCTCTACTTTGCTTCTAGCGGGTTGAAGACTGATGTAACTACGATCCATGGCGGTGCGGCGTGGGGGCTTCTTTGTCTGGTAATATTCACGGCGTGTGCTGGGAAGATTCTGGGGACTTTCGTGGTGGCCATGTTTTGCATGATCCCCGCCAGAGAATCGCTCACGCTTGGCGTGCTCATGAACACCAAGGGCCTCGTAGAGCTCATCGTACTCAACATTGGAAAAGAGAAAAAGGTTTTGAACGATGAAATGTTTGCACTCTTAGTACTCATGGCTCTATTCACCACTTTCATCACAACTCCAATAGTGATGGCCATCTACAAACCAGCTCGTGGAATCACAATGAAAACCCATCGGAAGCTAGGAGACATTAATTCCTTCAATTCCAACAATGAAATTGTCGACGAATTCCGAGTCTTGGCCTGTATCCACGGCCCAAATAATATCCCTTCTATCATCAGTTTCATCGAATCAACTCGTAGCACCACCAAGTCCTTTCTAAAGCTGTTCATGATGCACCTCGTTGAGCTCTCAGAGCGCTCATCCTCCATCACCATGGTTCAACGCGCTCACAAGAACGGTTTCCCTTTCTTCAGCCGGTCCCACCGTGACACGTGGCACGATCGCCTCGCTGCCGCGTTTCATGGCTACAGTCAACTGGGCCGAGTCAAAGTCCGGTCAACCACCGCTATCTCTTCTCTTTCTACAATGCATGAGGACGTTTGCCACGTGGCAGAGAATAAGAGGGTGACCATGATCATCTTACCGTTTCACAAACTGTGGAGGATAGAGATGGATGAGGATAACGAGAACCGTCATGTGCTAGAGAATTTGGGCCACGAATGGAGAGTGGTGAACCAAAGAGTACTTAAGAGTGCACCTTGCTCAGTGGCTGTGCTTGTGGACCGTGGCTATGGTAATCTGACTCAGACTCCAAGCCCAAGCCCAATTTCAACAGTGGCCCAACGAGTCTGCATCATCTTCTTCGGTGGGCCCGATGATCGCGAGGCCCTAGAGTTGGGGAAGAAAATGCTTGAACACCCAGTAGTTAAAGTACGTGTTGTAAGGTTTGTTGAAAAGGAGGACGGGCTGATGAATGGAAATAATACGGTGTTAAGCTTCTCAAATGACAAAAATAGTGACAAAAGTTACAGCTTCTCCACTGCTAAAATCAACCGCCAGAAAGAAAAGGAATTGGATGAGAAGGCAGTGGGCAAGTTTCGAAGCAAGTTGGACGAAATGGTGGAATATATTGAGAAGGTTAGTGAGAACATTGTGGAGGAAGTATTAGTAATAGGGAAGAGTGGGGATTATGATGTTATAATAGTTGGGAAGGGTCGATTTCCGTCGAATATGGTGGCTGGATTGGCAGAGAGGCAAGCAGAGCACGCGGAGTTAGGGCCCATTGGAGATGTTTTAACCTCATCGGAACATGTGGTGTCATCAGTACTGGTTATTCAACAACACGATGTAGCGTCGGTAGATGATGCTCCTGTATATAAGGTGCATGACAACATCAACGATAATGATTCGTCCCATAGGGTAGGGATTTCAATAGCAAACGACAATGTAGTGTAA 2538 0.5075 MPLNITSIKTSSNGVWQGDNPLDYAFPLLIIQIILVLAVSRSLALLLKPLRQPKVIAEIIGGVLLGPSALGRNKSYLHRIFPSWSMPTLESVASIGLLFFLFLVGLELDLHSIRRSGRRALSIAAVGISLPFICGIGVAIILRKTVDGADKAGFAQFLVFMGVAISITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWILLALAVALAGDGGGHKSPLVSVWVLLSGLGFVVFMMVVIRPAMKVVSGRGENDAVDEVYICLTLAGVLVCGFITDMIGIHSIFGAFVFGLTVPKDGNFAKRLMERIEDFVLGLLLPLYFASSGLKTDVTTIHGGAAWGLLCLVIFTACAGKILGTFVVAMFCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFALLVLMALFTTFITTPIVMAIYKPARGITMKTHRKLGDINSFNSNNEIVDEFRVLACIHGPNNIPSIISFIESTRSTTKSFLKLFMMHLVELSERSSSITMVQRAHKNGFPFFSRSHRDTWHDRLAAAFHGYSQLGRVKVRSTTAISSLSTMHEDVCHVAENKRVTMIILPFHKLWRIEMDEDNENRHVLENLGHEWRVVNQRVLKSAPCSVAVLVDRGYGNLTQTPSPSPISTVAQRVCIIFFGGPDDREALELGKKMLEHPVVKVRVVRFVEKEDGLMNGNNTVLSFSNDKNSDKSYSFSTAKINRQKEKELDEKAVGKFRSKLDEMVEYIEKVSENIVEEVLVIGKSGDYDVIIVGKGRFPSNMVAGLAERQAEHAELGPIGDVLTSSEHVVSSVLVIQQHDVASVDDAPVYKVHDNINDNDSSHRVGISIANDNVV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02959 845 PANTHER CATION/H + ANTIPORTER 8 810 - -
Pumo5g02959 845 FunFam Cation/H(+) antiporter 15 28 434 - -
Pumo5g02959 845 Gene3D - 28 432 IPR038770 -
Pumo5g02959 845 Gene3D - 488 787 - -
Pumo5g02959 845 Pfam Sodium/hydrogen exchanger family 34 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02959 Pumo-Chr5 77320904 77328698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02959 75 822 Antiporter Super Family AT3G53720 65.486 0.0 900