Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02954 ATGGCCGGAAAAGGAGAGGGTCCTGCTATCGGAATCGATCTCGGAACCACGTACTCTTGCGTCGGGGTCTGGCAACATGATCGCGTTGAAATCATCGCCAACGACCAAGGTAACAGAACGACGCCGTCTTACGTCGGATTCACCGACACCGAGCGTCTCATCGGTGATGCAGCCAAGAACCAAGTCGCCATGAACCCCATCAACACAGTCTTCGATGCTAAGAGGTTGATTGGTCGTAGATTCAGTGATGCCTCTGTTCAGAGTGATATTAAATTGTGGCCTTTCAAGGTCATTGCTGGTGCTGCTGACAAGCCAATGATTGTGGTTAACTACAAGGGTGAAGAGAAGCAATTTGCCGCGGAAGAAATCTCTTCCATGGTGCTCACGAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCTCTACGGTGAAGAATGCTGTTGTCACTGTCCCTGCTTACTTCAATGATTCCCAGCGTCAAGCTACCAAGGATGCTGGTGTCATTGCTGGTCTTAATGTAATGAGAATTATCAATGAGCCTACTGCAGCTGCCATTGCATATGGTCTTGATAAGAAGGCTACAAGTGTTGGTGAGAAGAATGTGTTGATTTTTGATCTTGGTGGTGGGACATTTGATGTCTCTTTACTCACCATTGAGGAGGGTATCTTCGAGGTGAAAGCCACAGCTGGGGACACCCATCTTGGAGGTGAGGATTTTGATAACAGGATGGTGAACCACTTTGTTCAAGAGTTTAAGAGAAAGAACAAGAAGGACATAAGTGGAAACCCCAGAGCACTTAGAAGGTTGAGGACTGCTTGTGAGAGGGCTAAGAGGACACTATCATCCACTGCCCAGACCACCATTGAAATTGATTCTCTATATGAGGGAATTGATTTCTACTCCACTGTTACTCGTGCTAGATTCGAGGAGCTCAATATGGATCTCTTTAGGAAATGTATGGAACCGGTGGAGAAATGTTTGAGGGATGCTAAAATGGACAAAAGAAGTGTTGATGATGTTGTCCTTGTTGGTGGTTCTACCAGAATTCCCAAGGTTCAACAACTATTGCAGGACTTCTTTAATGGAAAGGAGCTCTGTAAGAGCATTAATCCTGATGAGGCTGTTGCATACGGTGCTGCGGTTCAGGCTGCAATTTTAAGTGGTGAGGGCAATGAGAAGGTTCAAGATCTTCTCCTCCTAGATGTCACCCCTCTGTCTCTTGGTTTGGAGACTGCCGGTGGTGTGATGACTGTCCTGATCCCTAGGAACACTACAATTCCAACGAAGAAGGAACAGGTTTTCTCAACATATTCTGACAACCAGCCTGGTGTGCTGATCCAGGTCTTTGAAGGTGAAAGAGCAAGGACTAGAGATAACAATTTGTTGGGCAAATTTGAACTTTCTGGCATTCCTCCTGCTCCCAGGGGTGTCCCTCAGATTACAGTGTGCTTCGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAAGATAAAACCACTGGCCAGAAAAATAAGATCACTATCACCAATGACAAGGGCAGACTGTCAAAGGAAGATATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAATCCGAGGATGAAGAGCATAAGAAGAAGATCTCTCTTTTTGTCTTTGCCACACGCCGAAACGCAATGGCCGGAAAAGGAGAGGGTCCTGCTATCGGAATCGATCTCGGAACCACGTACTCTTGCGTCGGGGTCTGGCAACATGATCGCGTTGAAATCATCGCCAACGACCAAGGTAACAGAACGACGCCGTCTTACGTCGGATTCACCGACACCGAGCGTCTCATCGGTGATGCGGCCAAGAACCAAGTCGCCATGAACCCCATCAACACAGTCTTCGATGCTAAGAGGTTGATTGGTCGTAGATTCAGTGATGCCTCTGTTCAGAGTGATATTAAATTGTGGCCTTTCAAGGTCATTGCTGGTGCTGCTGACAAGCCAATGATTGTGGTTAACTACAAGGGTGAAGAGAAGCAATTTGCCGCGGAAGAAATCTCTTCCATGGTGCTCACGAAGATGCGTGAGATTGCCGAGGCTTACCTTGGCTCTACGGTGAAGAATGCTGTTGTCACTGTCCCTGCTTACTTCAATGATTCCCAGCGTCAAGCTACCAAGGATGCTGGTGTCATTGCTGGTCTTAATGTAATGAGAATTATCAATGAGCCTACTGCAGCTGCCATTGCATATGGTCTTGATAAGAAGGCTACAAGTGTTGGTGAGAAGAATGTGTTGATTTTTGATCTTGGTGGTGGGACATTTGATGTCTCTTTACTCACCATTGAGGAGGGTATCTTCGAGGTGAAAGCCACAGCTGGGGACACCCATCTTGGAGGTGAGGATTTTGATAACAGGATGGTGAACCACTTTGTTCAAGAGTTTAAGAGAAAGAACAAGAAGGATATAAGTGGGAACCCCAGAGCACTTAGAAGGTTGAGGACTGCTTGTGAGAGGGCTAAGAGGACACTATCATCCACTGCCCAGACCACCATTGAAATTGATTCTCTATATGAGGGGATTGATTTCTACTCCACTGTTACTCGTGCTAGATTCGAGGAGCTCAATATGGATCTCTTTAGGAAATGTATGGAACCGGTGGAGAAATGTTTGAGGGATGCTAAAATGGACAAAAGAAGTGTTGATGATGTTGTCCTTGTTGGTGGTTCTACCAGAATTCCCAAGGTTCAACAACTATTGCAGGACTTCTTTAATGGAAAGGAGCTCTGTAAGAGCATTAATCCTGATGAGGCTGTTGCATACGGTGCTGCGGTTCAGGCTGCAATTTTAAGTGGTGAGGGCAATGAGAAGGTTCAAGATCTTCTCCTCCTAGATGTCACCCCTCTGTCTCTTGGTTTGGAGACTGCCGGTGGTGTGATGACTGTCCTGATCCCTAGGAACACTACAATTCCAACGAAGAAGGAACAGGTTTTCTCAACATACTCTGACAACCAGCCTGGTGTGCTGATCCAGGTCTTTGAAGGTGAAAGAGCAAGGACTAGAGATAACAATTTGTTGGGCAAATTTGAACTTTCTGGCATTCCTCCTGCTCCCAGGGGTGTCCCTCAGATTACAGTGTGCTTCGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAAGATAAAACCACTGGCCAGAAAAATAAGATCACTATCACCAATGACAAGGGCAGACTGTCAAAGGAAGATATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAATCCGAGGATGAAGAGCATAAGAAGAAGGTTGAGGCCAAGAACGCCTTGGAAAACTATGCATACAACATGAGGAACACTGTGAAGGATGACAAGATTGGGGAAAAGCTTGATCCAGCTGACAAGAAGAAGATTGAGGAAGCAATTGAGCAAGCTATCCAGTGGCTAGACAGCAACCAGCTTGCAGAGGCAGATGAGTTTGAGGACAAAATGAAGGAATTGGAAAGCATCTGCAATCCTATCATTGCTAAGATGTACCAGGGTGGTGCTGGTCCAGACGTGGGTGGTGCTGGTGCTGGTGCAGCAGACGATGATTATGCTGCTCCTTCTGGTGGAAGTGGTGCTGGCCCCAAGATTGAGGAAGTGGACTAA 3624 0.4647 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGAADKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTVTRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKISLFVFATRRNAMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGAADKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTVTRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDDKIGEKLDPADKKKIEEAIEQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDVGGAGAGAADDDYAAPSGGSGAGPKIEEVD 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02954 1207 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Pumo5g02954 1207 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 36 48 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 337 353 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 369 389 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 396 415 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 146 166 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 8 21 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 58 66 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 209 219 - -
Pumo5g02954 1207 PRINTS 70kDa heat shock protein signature 477 493 - -
Pumo5g02954 1207 ProSitePatterns Heat shock hsp70 proteins family signature 3. 893 907 IPR018181 -
Pumo5g02954 1207 Gene3D Actin; Chain A, domain 4 788 871 - -
Pumo5g02954 1207 Gene3D Actin; Chain A, domain 4 235 318 - -
Pumo5g02954 1207 FunFam Heat shock 70 kDa protein 1092 1207 - -
Pumo5g02954 1207 FunFam Heat shock 70 kDa protein 750 813 - -
Pumo5g02954 1207 Gene3D - 192 366 - -
Pumo5g02954 1207 ProSitePatterns Heat shock hsp70 proteins family signature 1. 565 572 IPR018181 -
Pumo5g02954 1207 FunFam Heat shock 70 kDa 788 871 - -
Pumo5g02954 1207 FunFam Heat shock 70 kDa 944 1098 - -
Pumo5g02954 1207 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1096 1177 IPR029048 -
Pumo5g02954 1207 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pumo5g02954 1207 Gene3D - 10 383 - -
Pumo5g02954 1207 FunFam Heat shock 70 kDa protein 197 260 - -
Pumo5g02954 1207 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Pumo5g02954 1207 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Pumo5g02954 1207 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 384 554 IPR029047 -
Pumo5g02954 1207 FunFam Heat shock 70 kDa protein 624 679 - -
Pumo5g02954 1207 SUPERFAMILY Actin-like ATPase domain 561 744 IPR043129 -
Pumo5g02954 1207 FunFam Heat shock protein 70 563 749 - -
Pumo5g02954 1207 Gene3D - 1098 1172 IPR029048 -
Pumo5g02954 1207 SUPERFAMILY Actin-like ATPase domain 751 941 IPR043129 -
Pumo5g02954 1207 Coils Coil 1074 1094 - -
Pumo5g02954 1207 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Pumo5g02954 1207 Gene3D - 563 937 - -
Pumo5g02954 1207 PANTHER HEAT SHOCK PROTEIN 70KDA 562 1136 IPR013126 GO:0005524|GO:0140662
Pumo5g02954 1207 MobiDBLite consensus disorder prediction 1173 1207 - -
Pumo5g02954 1207 FunFam Heat shock 70 kDa 235 318 - -
Pumo5g02954 1207 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Pumo5g02954 1207 ProSitePatterns Heat shock hsp70 proteins family signature 2. 756 769 IPR018181 -
Pumo5g02954 1207 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 945 1102 IPR029047 -
Pumo5g02954 1207 Gene3D - 624 679 - -
Pumo5g02954 1207 Gene3D - 71 126 - -
Pumo5g02954 1207 FunFam Heat shock 70 kDa protein 71 126 - -
Pumo5g02954 1207 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 543 IPR029047 -
Pumo5g02954 1207 FunFam Heat shock 70 kDa 391 544 - -
Pumo5g02954 1207 Coils Coil 521 541 - -
Pumo5g02954 1207 Gene3D - 745 919 - -
Pumo5g02954 1207 CDD HSPA1-2_6-8-like_NBD 562 940 - -
Pumo5g02954 1207 FunFam Heat shock cognate 70 kDa protein 2 872 919 - -
Pumo5g02954 1207 Pfam Hsp70 protein 562 1171 IPR013126 GO:0005524|GO:0140662
Pumo5g02954 1207 Pfam Hsp70 protein 9 542 IPR013126 GO:0005524|GO:0140662
Pumo5g02954 1207 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 944 1097 IPR029047 -
Pumo5g02954 1207 FunFam Heat shock protein 70 10 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02954 Pumo-Chr5 77181554 77235260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02954 1 542 Calmodulin-binding Proteins AT5G02490 93.911 0.0 1059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02954 K03283 - hbr:110636145 1889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02954 5 77181554 77235260 Pumo3g02563 3 38708510 38710420 ECH
Pumo5g02954 5 77181554 77235260 Pumo5g02954 5 77181554 77235260 ECH
Pumo3g02563 3 38708510 38710420 Pumo5g02954 5 77181554 77235260 ECH
Pumo5g02954 5 77181554 77235260 Pumo3g02563 3 38708510 38710420 PCT