Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02945 ATGGAACCTTGTCAGTTAACAGCACTTATTGTTGAGGATGACATGGTGATCCGAATGGTTCATCGAAAGATGCTGAAGAGTGTTGGATTGAAAATTCAAGTCGCAGAAAATGGAAAAGAAGCTGTAGAAATTCACCGCTCCGGACAAAGTTTTGACCTAATTCTCATGGATAGGGACATGCCTATGATGAATGGCATTGAGGCTACAAAGACACTTCGATCAATGGGGGTTAATAGCATGATTGCTGGTGTATCAACACGCTCAGTGACAGCACATATACGAGAATTTATGGAAGCAGGACTAGATGACTACCTAGAGAAGCCCTTGACCCTTCATAAGCTTACTTCGATCATTCACAAGATGAACAAATCAATTAAGTTAGATTAG 387 0.4083 MEPCQLTALIVEDDMVIRMVHRKMLKSVGLKIQVAENGKEAVEIHRSGQSFDLILMDRDMPMMNGIEATKTLRSMGVNSMIAGVSTRSVTAHIREFMEAGLDDYLEKPLTLHKLTSIIHKMNKSIKLD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02945 128 CDD REC_hyHK_CKI1_RcsC-like 9 118 - -
Pumo5g02945 128 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 126 - -
Pumo5g02945 128 Pfam Response regulator receiver domain 9 118 IPR001789 GO:0000160
Pumo5g02945 128 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
Pumo5g02945 128 SUPERFAMILY CheY-like 6 122 IPR011006 -
Pumo5g02945 128 SMART REC_2 6 118 IPR001789 GO:0000160
Pumo5g02945 128 Gene3D - 2 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02945 Pumo-Chr5 77049490 77050068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02945 6 118 Response Regulator Gene Family AT3G04280 48.696 6.75e-29 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo5g02945 Response_reg 6.4e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02945 - - gmx:100795467 199.134