Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02940 ATGAATGGGGTGCATAACAGAAGGGTTCACAATGTTGAGAAACCTTTTCCAGGATGCCTGGGAAGAATGGTGAATCTCTTTGATTTGACTGGGGGTGTAAATGGAAACAAACTACTCACGGACAGGCCTCATCGCGATGCATCTTCACTTTCAAGAAGTCAATCAGATGTTGCAAGGATCATGAGTCCTACCTTGGGTGATCAGATAGAGGATAAGCTGATTGTCTCTGACTCAATGAGAGCTTCTTTGAATAAGAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAAGTTGTTTCCAAGCACAACCCACCACCAAATGTAGTTGCAAAATTAATGGGGCTTGAAGCCCTCCCACAGGGTGAGCCTAATTTATCTGTGGAGAGAAGTCAATGCCATAGAGGAGATTATTCTCAACATATGTGTGGTCATTCAGGGACACCATCCAACCACTGGCAACTGGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAGTTCATCCAAACACAGATCAGATTGCTTACAAAGATATTTATGATATATGGTTGCAATCACAGAGAACAAGCAATGTAAGAGACAAGACACCGGAGAGAGAAAAGTGGACTGAAGATGTTAATGGGAAGAAAATGGCTCTCATTCGCCAGAAATTTATGGAAGCTAAACGTCTGTCTACAGATGAGAGACTACGCCAGTCCAAGGAGTTTGAGGATGCCTTGGAAGTTTTAAGTTCCAATAATGATCTGTTAATCAGGTTATTGGATTCTCAAAATCTTTATGAACTTCAGTCTACTCCAGTAGCAGAGACAAAGCGTATTACTGTTCTTAAACCTTCGAAGATGGTTGACAATGAAAAATCTGTTGGAAAGGGGAAGAAAAATGACAAGCAGATTAAGAAACCATCAAATATTGGTGCTGGATGGGAGAAATACAGTCCTGCATACTCTCCAGCCAGTCAGAAAGTTGACGAGTTTCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCCCTGGGAAGACACATGAGATTAAGGCTGTGGCTTCTACAATGTCATCACCTCGAAATCTGCAGAGTGGAAATTTCTACCAGGAACCTGAGGATGATGATGTACTGGATTCAAGAAAAGTGGCAAGTGAAATTACACAGCAAATGCATGAAAATCTGAGGAGCCATCAAAGAGATGAAACATTGTATTCTTCAGTATATTCCAATGGCTATACTGGTGATGAGAGTTCATTCAACAAATCAGATCATGAGTACACTGCAGGGAACTTCAGTGATTTGGAAGTTATGTCCCCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGTCCTTTTTCTTCATCATCCTTCAGCCGTGCATCCTGTTCTCCTGAGTCGTCAGTATGTAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCGTCAAATAAGGGTCCTCAAGAACAAAGGCATATGCGAAGAAGCTCTACCTTGGGTGAAATGCTTGCCCTTTCGGATATAAAGAAATCTCTAATATCTGAGCTTGAGGGTATTCCTAAAGAACAGGAACCAAGTGAATCTGTTTCTTGTAGTCGAAATTTTAATGCTGAAACATGTGTGGATGGTTCTCCTAGAAACCTTTCTAGGTCAAAATCTGTTCCGGCATCTTCTACTGTCTATGAAAATGGGCACAATGTTGAAGTTTGTGATAATGGTGCTGGCAAAGCACATGGGTCTGGGGAGCTGACGAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACAAGTTTCTTCTTCTCAAGGAATAAGAAACCATCCAGGGAAAAATCTTGTCTATCTCAACCTAAAAATGAATCCCAATCTACTGTCACAGAAGCATCAGATTCTCCGGTAAATTCATCTAGAGTCCTTAGGGATGATGTGTCTCAAAGCTTCAACAGTGGATCCATTGGAGAGTGTTCTCTTCCAGCTCCATATGAATCATCAAGCAAAATTTTATCAGATTCTATCTCTAATGGACAAGGCGTTGTACCACTAGAGCCTGGATTGACTCTGTCAAAGCCCACGGTGCCTGGGAATTCAAGTGAAAACCAGGGTCAGCCCAGTCCAATTTCAGTTTTAGAGCCTCCCTTTGAAGATGATAATGCTGTAATCGAGTCCTTGGGCTGTGTGAGGGGTGGTCAGCTGGGATCACGGGTGTCTCTGAAGTCAAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGGACCCTCTCATGGGATGATTCTTGTGCAGAGGTGGCAAGTCCATACCCATTAAAGCCCTCGTTGGTATCCTTAGATACCAAGGTAGAGGATCAAGACTGGCTTGTCTTTGTCGAGAAACTACTATCAGCTGCTGGAATTGATGATCAAGTGCAGCCTGACTCGTTTTACTCAAGATGGCATTCCCTTGAAAACCCATTGGATCCATCATTGAGGGACACATATGCCAACTTCAATGACAAGGAGCCTCAGCAACTCCACGAGGCCAAGCGAAGGCAGAGGAGGTCTAATCAGAAGCTTGTATTCGATTGTGTCAATGTGGCACTAATAGAAATTACTGGTTATGGATCAGAGAATTACTTGATGGGTAGGTTGTGGAGTGGGAGCCACAGCAGGCTCCAAGTCCCAGAAGCTGCACCTCCCCCATTGGTGGATCTCATTGTGGCCCAGATGAAGGAGTTAATATCTAGTGCTATGAGTTCTGTTTGGTTGGATTGTGGGGACAGTAACAGCCTAGTGGTAGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTTGGTTGAGCTTATGGGATTGGAGATGGATATTTTGGTGAAGGAAGTAGAAGGGAAGTTGCTAGAAGAACTTGTGGAGGATGCGGTGGTTGATTTGACAAGCAGGGCCTGA 2949 0.431 MNGVHNRRVHNVEKPFPGCLGRMVNLFDLTGGVNGNKLLTDRPHRDASSLSRSQSDVARIMSPTLGDQIEDKLIVSDSMRASLNKKINGTPIKMLIDQEMSKEVVSKHNPPPNVVAKLMGLEALPQGEPNLSVERSQCHRGDYSQHMCGHSGTPSNHWQLEDRFMDKEMLHEVHPNTDQIAYKDIYDIWLQSQRTSNVRDKTPEREKWTEDVNGKKMALIRQKFMEAKRLSTDERLRQSKEFEDALEVLSSNNDLLIRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNEKSVGKGKKNDKQIKKPSNIGAGWEKYSPAYSPASQKVDEFPVQPTRIVVLKPSPGKTHEIKAVASTMSSPRNLQSGNFYQEPEDDDVLDSRKVASEITQQMHENLRSHQRDETLYSSVYSNGYTGDESSFNKSDHEYTAGNFSDLEVMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASNKGPQEQRHMRRSSTLGEMLALSDIKKSLISELEGIPKEQEPSESVSCSRNFNAETCVDGSPRNLSRSKSVPASSTVYENGHNVEVCDNGAGKAHGSGELTKSKSMKSSFKGKVTSFFFSRNKKPSREKSCLSQPKNESQSTVTEASDSPVNSSRVLRDDVSQSFNSGSIGECSLPAPYESSSKILSDSISNGQGVVPLEPGLTLSKPTVPGNSSENQGQPSPISVLEPPFEDDNAVIESLGCVRGGQLGSRVSLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLVSLDTKVEDQDWLVFVEKLLSAAGIDDQVQPDSFYSRWHSLENPLDPSLRDTYANFNDKEPQQLHEAKRRQRRSNQKLVFDCVNVALIEITGYGSENYLMGRLWSGSHSRLQVPEAAPPPLVDLIVAQMKELISSAMSSVWLDCGDSNSLVVESVVRKEVVGKGLVELMGLEMDILVKEVEGKLLEELVEDAVVDLTSRA 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02940 982 MobiDBLite consensus disorder prediction 687 717 - -
Pumo5g02940 982 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 981 - -
Pumo5g02940 982 MobiDBLite consensus disorder prediction 290 305 - -
Pumo5g02940 982 MobiDBLite consensus disorder prediction 616 646 - -
Pumo5g02940 982 MobiDBLite consensus disorder prediction 290 310 - -
Pumo5g02940 982 Pfam Domain of unknown function (DUF4378) 795 973 IPR025486 -
Pumo5g02940 982 Pfam Protein of unknown function (DUF3741) 221 264 IPR022212 -
Pumo5g02940 982 MobiDBLite consensus disorder prediction 622 646 - -
Pumo5g02940 982 MobiDBLite consensus disorder prediction 697 714 - -
Pumo5g02940 982 Pfam DUF761-associated sequence motif 111 126 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02940 Pumo-Chr5 76974297 76980005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02940 1 979 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.940 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02940 - - gmx:100816611 1759.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02940 5 76974297 76980005 Pumo5g02940 5 76974297 76980005 ECH
Pumo5g02940 5 76974297 76980005 Pumo3g02547 3 38498238 38503673 PCT