Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02939 ATGGAGAATTTGTTTCGCCTAGTAGACCACGAAGACTTCTTCACTCGCCGTTGCATTTGGGTGAATGGCCCTATAATCGTAGGGGCAGGTCCCTCAGGGCTTGCCACAGCAGCATGCCTTAGAGAACAAGGGGTGCCCTTCATGGTTCTCGAACGTGCAGATTGCATAGCCTCACTGTGGCAAAAACGCACCTACGACAGACTCAAACTTCACCTTCCAAAACAGTTCTGCCAGCTCCCAAAACTTCCTTTCCCTGAAGACTTCCCCGAATACCCCACAAAGAAACAATTCATAGAGTACTTAGAGTCCTACGCTAAGCACTTCGAGATCAACCCTCAGTTCAACGAGTGTGTGCAGTCTGCGAGGTACGATGAGACAAGTGGCTTGTGGCGGGTTAAGACCGTTTCCTCGAGTGGCGCTACACGCAACGAGGTTGAGTACATTTGCAGGTGGCTCGTGGTGGCCACTGGGGAGAATGCGGAGTGTGTTGTGCCTGAGATTGAAGGGTTGAGTGAGTTCAAAGGTGATGTGATCCATGCTTGTTATTACAAGTCAGGGGAGAGCTTCAGGGGAAAGAAGGTTCTTGTTGTTGGTTGTGGCAATTCAGGCATGGAACTCTCACTTGACCTTTGCAACCACCATGCTTCTCCGTCCATGGTCGTTCGTAGCTCGGTTCACGTGTTGCCTAGAGAAGTGTTTGGGAAATCAACTTTTGAATTGGCGGTTATGATGCTGCGATGGCTGCCACTTTGGCTTGTTGACAAGATTCTCTTGATCTTGGCATGGTTTGTTTTGGGGAACATTGAGAAGTTGGGGCTCAAAAGGCCTTCAAGGGGTCCTTTGGAGCTGAAGAACACAAAGGGAAAGACCCCAGTTTTGGATATTGGTGCCTTGGAGAAGATTAGATCCGGTGAAATAGAAGTGGTCCCAGGAATCAAGAGGTTCAATAATGGGGAAGTTGAACTTATTAATGGTGAAAAGCTTGATGTTGATGCAGTAGTGCTTGCTACCGGTTACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCAAAGATGCCATTCCCTCATGGTTGGAAGGGAAATGCTGGGCTTTATGCTGTGGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTGTGAAAATTGCTCAAGATATTGGCCAAGTTTGGAAAAATGAGACTAAGCAAAAGAAACAGCGCACTACTGCTTGTCATAGACGTTGCATTTCCCAGTTCTAA 1272 0.4788 MENLFRLVDHEDFFTRRCIWVNGPIIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYAKHFEINPQFNECVQSARYDETSGLWRVKTVSSSGATRNEVEYICRWLVVATGENAECVVPEIEGLSEFKGDVIHACYYKSGESFRGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREVFGKSTFELAVMMLRWLPLWLVDKILLILAWFVLGNIEKLGLKRPSRGPLELKNTKGKTPVLDIGALEKIRSGEIEVVPGIKRFNNGEVELINGEKLDVDAVVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGQVWKNETKQKKQRTTACHRRCISQF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02939 423 Gene3D - 24 407 IPR036188 -
Pumo5g02939 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Pumo5g02939 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Pumo5g02939 423 FunFam Flavin-containing monooxygenase 24 406 - -
Pumo5g02939 423 SUPERFAMILY FAD/NAD(P)-binding domain 190 401 IPR036188 -
Pumo5g02939 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 417 - -
Pumo5g02939 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Pumo5g02939 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Pumo5g02939 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 297 IPR036188 -
Pumo5g02939 423 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02939 Pumo-Chr5 76934808 76936654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02939 K11816 - gmx:100819987 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02939 5 76934808 76936654 Pumo5g02939 5 76934808 76936654 ECH
Pumo3g01907 3 30169978 30179391 Pumo5g02939 5 76934808 76936654 PCT