Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02937 ATGGCTGCGGCTGCCAATCCTGTAGTTGGGTCCCATATTTGGGTGGAGGATCCCAATGTGGCTTGGATAGATGGTGAGGTCTTGGAGGTTAAAGGAGAAGAAATTAAAGTCCTTTGCACTTCAGGGAAGATGGTTGTTGTTAAAGCTTCCAATATTTATCATAAAGATACAGAAGTCCCACCAAGTGGAGTGGATGATATGACAAAGCTTGCATACCTGCATGAACCTGGAGTCCTAGATAATCTGAGATCAAGATATGATATAAACGAAATTTATACTTACACCGGGAATATATTGATTGCTGTGAACCCTTTCATAAAGCTTCCTCATTTATATGATAGCCATATGATGGCCCAATATAAAGGAGCAGCTTTTGGTGAGCTAAGCCCTCATCCCTTTGCTGTTGCAGATGCAGCATATAGGCTTATGATAAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGAGCTGGTAAAACAGAAAGTACCAAGTTACTCATGAGGTATCTTGCTTACATGGGTGGGAGAGCTGCTTCTGCTGAAGGTAGAACTGTTGAGCAAAAGGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGAATATCAGGGGCTGCTATCAGGACTTATCTGCTTGAAAGGTCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAACTATCATTGTTTCTACATGCTCTGTGCTGCACCTCCGGAGGATGTTAAAAAGTACAAATTAGGAGATCCAAGAATGTTTCATTATCTGAATCAATCAAATTGCTTTGAGTTGGAAGGGCTTGATGAATCTAAAGAATATAGGGATACAAGGAGAGCAATGGATATTGTTGGAATAAGTTCTGAGGAACAGGATGCAATATTTAAAGTAGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTGCGAAAGGGAAGGAGATAGACTCATCTGTGCCCAAAGATGAAAAATCTCGGTTCCATCTACAGACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGTGATGAAACAATTACAAAATGGCTGGATCCGGAAGCTGCTGCACTCAGCCGAGATGCCTTGGCTAAGATTGTGTACACAAGATTGTTTGACTGGCTGGTTGATAAAATTAATAATTCTATTGGTCAAGACCCTGAGTCAAAATCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAGTACAAAAAAGAGGAAATTGATTGGAGTTACATTGAATTTGTGGACAATCAAGATATTCTGGATCTCATTGAAAAGGTCACTTATCAAACTGAATTGTTCCTCGACAAGAACAAAGATTATGTTGTTGCTGAGCACCAGGCACTTCTTTATGCTTCCAAATGCCCCTTTGTATCGGGCTTGTTTCCCCCTTCACCCGAAGAATCTTCTAAACAATCAAAGTTCTCTTCAATTGGTTCACGATTTAAGCAACAATTGCAATCTTTACTTGAAACTCTCAGTGCCACTGAGCCACACTACATTCGTTGTGTAAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTCTGCTGCAACTACGTTGTGGGCATTTGGACTGTGAAAACAACCATGATTATACTCCTCCAGCCAGAGGTTTTTAA 1854 0.3991 MAAAANPVVGSHIWVEDPNVAWIDGEVLEVKGEEIKVLCTSGKMVVVKASNIYHKDTEVPPSGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAASAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRMFHYLNQSNCFELEGLDESKEYRDTRRAMDIVGISSEEQDAIFKVVAAILHLGNIEFAKGKEIDSSVPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGHLDCENNHDYTPPARGF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02937 617 ProSiteProfiles Myosin motor domain profile. 62 503 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 Gene3D Kinesin motor domain 570 600 IPR036961 -
Pumo5g02937 617 FunFam Myosin 2 313 431 - -
Pumo5g02937 617 Pfam Myosin head (motor domain) 64 499 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 Gene3D - 253 311 - -
Pumo5g02937 617 Gene3D - 440 499 - -
Pumo5g02937 617 Gene3D Kinesin motor domain 65 439 IPR036961 -
Pumo5g02937 617 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 601 IPR027417 -
Pumo5g02937 617 CDD MYSc_Myo11 76 600 IPR036018 -
Pumo5g02937 617 Gene3D Myosin VI head, motor domain, U50 subdomain 313 423 - -
Pumo5g02937 617 Gene3D Myosin VI head, motor domain, U50 subdomain 514 547 - -
Pumo5g02937 617 PANTHER MYOSIN 58 499 - -
Pumo5g02937 617 FunFam Myosin heavy chain 253 308 - -
Pumo5g02937 617 Gene3D - 500 569 - -
Pumo5g02937 617 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 ProSiteProfiles Myosin motor domain profile. 504 602 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo5g02937 617 SMART MYSc_2a 56 617 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02937 Pumo-Chr5 76875752 76885571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02937 1 600 Myosins gene family AT1G04160 75.267 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02937 K10357 - gmx:100819463 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02937 5 76875752 76885571 Pumo5g02937 5 76875752 76885571 ECH
Pumo5g02937 5 76875752 76885571 Pumo3g02528 3 38223572 38230021 PCT