Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02933 ATGACCGCCGGCGGCTGCTCTGCCGGAATTTCGCTAACTTCCGGTCGCTCCTCGAAGCCTCTCTCTCCTGACGATGCTCTTCGCCGGTGTCGCGTGCGGCGAGAGAGAATGCCGGTGTCGGTTGTCTTCCTCCTTGTTCTTCTCAACTTGCTTTTCTCTTGCCAAGTGAAGTCGATTTCTCTGAGTGTGTCGTTTGCTTCATCAGAACTAGCTAAAATGTGGTTTGTTAAACCTTCTTCTGGACCATCTTCTGCACCTGTGCCATCTCCTTCTTATCAAGGTCCTCATGTGATTCCAAGACCAAGACATCATTATCATCACCGTCACCATCACAGCATGAGACCTTATGTAGCAGCTCCACCTCCTTCAAAAGACCAAGCTTGTGACCAAATATGTACTGATCCGCTCACATCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAATCAGACTTACACTGGATGTAGCTCCTTATGCTGTTTTTCCGGTAATGACTGAGTTAGAGAATGAAATTGCATTAGGCACATATTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGATGGTCAAAATCAGGGAAGAACTGTTGTTGATATTAACTTGGTTCCACTGGGAGAGAAATTTGACAATACAACTGCAGCTCTTACATATGAGAGGTTTTGGCACAAGAAAGTTCCTCTAAATAGGAGCCTTTTTGGTGATTATGCTGTTGTGTACATCACTTATCCAGGAATGCCATCATCGCCGCCATATGGATCTTTAACTGGGAGCGGTCCTAGTCAAAGTGTTGATGGTATTCTGCCAGTCAGTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTCAGGACCATAATCATCATTGCTTTATCTTCCTTTGTACTCTTGCTGGTTTTGGTGGGAGCATTTTCAATTATTTTGAAATGGAGGAAGACTAGGAGACCATCAAGTGCTGTTGGCCCTGCATTCACATCATCTCTAAATAAGAGATCAGGCTTGGGATCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCGCTTATGTCCACAATGGCTACTTCCATTCTCTCTGTTAAAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTTAATTCAAAGAGAGTACTAGGTGAAGGAGGATTTGGACGTGTTTATAGTGGGACATTGGAAGATGGGGCTGAAGTTGCAGTTAAGCTGCTCACAAGGGATAATCGTCAGAATGGAGACCGTGAATTTATTGCAGAGGTTGAAATGCTAAGCCGTTTGCATCATCGTAATTTAGTGAAATTGATTGGTATATGCATTGAAGGCCGAAGGCGTTGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTTGAGTCCCATCTGCATGGTGATGACACGATGAAGGGAATGCTAGATTGGGAAGCACGGATGAAAATTGCCCTAGGAGCAGCAAGAGGATTGGCCTATCTTCACGAGGATTCCAATCCCCGAGTAATTCACCGAGACTTTAAAGCTAGCAATGTGTTACTAGAAGATGACTTTACTCCCAAAGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTAATCATATTTCAACACGGGTGATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTCAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTCACAGGCAGAAAGCCGGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTAACTTGGGCACGGCCAATGTTGACGAGTAGAGAAGGTGTAGAACAGCTGGTGGATCCATCTTTGGCTGGAACTTACAACTTTGATGACATGGCAAAGGTTGCTGCTATTGCTTCCATGTGCGTTCACCCGGAGGTTACACACAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTCAAGTTAATATACAACGATACAGATGAGACTTGTGGAGATTGTTGTAGTCAGAAGGATTCCTCTGCTCAGGAGTCTGATTTTAGAGGTGACCTTGCCCCTTCTGATAGCAGTTGGTGGAACGCGGGAGGGCTAACCCCTCGATTAACTTACGGGCAAGCATCTTCCTTCATCACTATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAGAACAGACCGTTTTCAACTTCAAGCTTGATTGGAGATGAAATATCTTTACCAATTAGGCATGGGAATAGATCAGGCCCCTTAAGAACAGTCCGAAGCAAGCTGTCCTTACATAGATTTACAGGAAGTCGGAGTGAGCATGGAGGACCTTCTTCCAAGCGCAATTGGAATGATGGTTACTGGATTTAA 2358 0.4453 MTAGGCSAGISLTSGRSSKPLSPDDALRRCRVRRERMPVSVVFLLVLLNLLFSCQVKSISLSVSFASSELAKMWFVKPSSGPSSAPVPSPSYQGPHVIPRPRHHYHHRHHHSMRPYVAAPPPSKDQACDQICTDPLTSTPFGSPCGCVFPMKIRLTLDVAPYAVFPVMTELENEIALGTYLEQSQVKIMGATADGQNQGRTVVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAVVYITYPGMPSSPPYGSLTGSGPSQSVDGILPVSANFVSKNQKMNLRTIIIIALSSFVLLLVLVGAFSIILKWRKTRRPSSAVGPAFTSSLNKRSGLGSMLSSSITSSTSVSLMSTMATSILSVKTFSLSELEKATDKFNSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNRQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGDDTMKGMLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPMLTSREGVEQLVDPSLAGTYNFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETCGDCCSQKDSSAQESDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLIGDEISLPIRHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKRNWNDGYWI 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02933 785 CDD STKc_IRAK 387 657 - -
Pumo5g02933 785 MobiDBLite consensus disorder prediction 763 785 - -
Pumo5g02933 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Pumo5g02933 785 FunFam receptor-like serine/threonine-protein kinase ALE2 354 457 - -
Pumo5g02933 785 Pfam Protein tyrosine and serine/threonine kinase 383 654 IPR001245 GO:0004672|GO:0006468
Pumo5g02933 785 ProSiteProfiles Protein kinase domain profile. 381 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02933 785 SUPERFAMILY Protein kinase-like (PK-like) 359 657 IPR011009 -
Pumo5g02933 785 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Pumo5g02933 785 Gene3D Phosphorylase Kinase; domain 1 352 457 - -
Pumo5g02933 785 FunFam Receptor-like serine/threonine-protein kinase ALE2 458 675 - -
Pumo5g02933 785 Gene3D Transferase(Phosphotransferase) domain 1 458 679 - -
Pumo5g02933 785 PANTHER OS01G0750732 PROTEIN 120 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02933 Pumo-Chr5 76840593 76847262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02933 131 774 Receptor kinase-like Gene Family AT5G56890 53.743 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pumo5g02933 PK_Tyr_Ser-Thr 7.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02933 - - gmx:100792309 1419.45