Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02915 ATGCCAGCCCCGGTTGTGTTAGTGTTGATTTGGAAACACGTGACGTTCGGATTGGAAACGTGGTTCAAGTTGTCGGTGTTGTCTTGTTTCTATGTTCTGTTGGTGCAAGTTTTGGTCTTGGGGTTTGATGGGGTGGCTTTGATTAGAGGAATAAGGGATGTGGATGTGGATTTGGATTTGGGTTTGGCTCTTCTTTCTCTGCCTCTTGTGCAGGGTTTAGCTTGGGTTGTGTTGAGCTTCTCGGCTTTGCATTGCAAGTTCAAGGCGTGTGAGAGGTTTCCAATTTTGCTCAGAGTTTGGTGGTTTGTGTTGTTTGCTATTTGTTTGTGTGGTTTGGGTGTTACTGGTATAAAGGTTTTTAGGAGTTCCGAGGAGCAGCAGCCATTGCTTGTTGAGGAAGAACCGGGGTGTCTCAAGGTTACTCCTTATAGTGATGCTGGACTTTTTAGCTTGACCACTTTGTCTTGGTTGAATCCACTTCTTTCCATTGGGGCAAAAAGGCCACTTGAGCTTAAGGACATTCCCCTTGTTGCACCGAAAGATCGATCCAAGACAAATTATAAGGTTTTGAATTCTAATTGGGAGAGATTGAAGGCGGAAAACACGTCTGGGCAGCCTTCATTGGCTTTGGCACTTCTCAAGTCGTTCTGGAAGGAGGCGGCTTGTAATGCCATATTTGCTGGTATCACTACTCTTGTCTCGTATGTTGGTCCATACATGATAAGTTACTTTGTTGATTACTTAGTTGGCAAAGAAATTTTCCCACATGAGGGGTATGTCCTTGCAGGGATATTCTTTGTGGCTAAGCTTGTGGAGACCTTGACTACTAGGCAGTGGTATCTAGGGGTGGACATCTTGGGTATGCATGTTAGGTCGGCTCTAACTGCAATGGTATATCGAAAGGGGCTAAGGATATCAAGCTTGGCCAAGCAAAGTCACACGAGTGGGGAGGTTGTTAACTACATGGCTATTGATGTTCAGAGGGTTGGGGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTGCAGATTGTTCTTGCCCTTGCAATTTTGTATAAGAATGTTGGAATTGCATCTATTGCAACGCTGATTGCTACAATAATTTCCATTGTCGTCACTGTTCCTGTGGCCAGGATCCAAGAAAATTATCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCTGAGTGCCTGAGGAATATGAGGATTCTCAAACTTCAAGCTTGGGAGGACAGATATAGAGTGAAATTGGAGGAAATGCGTGGAGTAGAGTTCAAGTGGCTTCGGAAAGCCCTCTATTCTCAGGCTTTCATAACTTTCATATTCTGGAGCTCCCCTATATTTGTTTCGGCAGTCACTTTTGGTACTTCCATATTGTTGGGTGGCCAGCTGACTGCTGGTGGTGTACTTTCTGCTCTGGCTACTTTCAGGATCCTGCAAGAACCTTTGAGGAATTTCCCAGACTTGGTGTCAACAATGGCTCAGACAAAGGTTTCTCTTGACCGGTTATCTGGTTTCCTGCTGGAGGAAGAATTGCAGGAAGATGCAACTATTGTCTTGCCACAAGGCATTACTAACATTGCTATAGAAATTAAGGATGGTGTCTTCTGTTGGGACCCTTCTGAATCTTGTAGGCCTACCCTATCAGGGATAAGTATGAAAGTTGAAAAAGGGATGCGCGTGGCTGTTTGTGGTATGGTTGGTTCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTCAGAGTGTGTGGCTCTGCTGCATATGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAATATCCTCTTTGGAAGCCCAATGGACAAAGCAAAAGGTATAAACCTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTCAGTGCAGTTGATGCTCACACTGGATCAGACTTGTTTAGGGAGTATATATTGACAGCACTAGCAAATAAAACAGTCATTTATGTGACCCATCAAGTTGAATTTCTTCCCGCTGCTGATTTGATACTGGTTCTTAAAGAAGGCTGCATCATACAAGCAGGAAAGTATGACGATCTTTTACAAGCAGGAACAGATTTTAATACTCTGGTTTCAGCTCACCATGAAGCCATAGAGGCTATGGATATCCCTACTCACTCCTCTGAAGATTCAGATGAAAATTTATCCCTGGAGGCATCTGTTATGACCAGTAAGAAATCCATTTGTTCTGCAAACGATATAGACAGTTTGGCAAAGGAAGTGCAAGAGGGAGCATCTACTTCAGATCAAAAAGCAATTAAGGAGAAGAAGAAAGCAAAGCGATCAAGAAAGAAACAGCTTGTTCAGGAAGAGGAGAGGATTAGAGGTAGAGTCAGCATGAAGGTGTATTTGTCATACATGGCAGCAGCATATAAAGGCTTATTGATTCCACTCATAATCATTGCACAAGCATTATTTCAGTTCCTTCAGATTGCTAGCAATTGGTGGATGGCTTGGGCTAACCCTCAAACAGAAGGAGACCTTCCCAAAGTAACTCCCTCAGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGCAGCTCATGGTTTATATTTGTAAGGGCTGTTTTGGTGGCTACATTTGGTCTTGCAGCTGCACAGAAGCTATTTTTGAAAATGCTTAAAAGTGTTTTCCGTGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATCGGGTATCAATTGATCAAAGTGTTGTGGATCTTGACATTCCTTTCAGACTTGGTGGGTTTGCTTCAACAACAATACAGCTTATTGGTATTGTTGGTGTAATGACAGAAGTTACATGGCAAGTTTTGCTCTTAGTTGTCCCAATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTTCGTATTGTTAGCATCCAGAAGTCTCCAATTATAAATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTCTATCTTCTTGATTGCTTTGCACGACCGTTCTTCTGCAGTCTTTCTGCAATTGAGTGGCTCTGCCTGCGGATGGAGTTACTGTCAACCTTTGTATTTGCTTTCTGCATGGTATTACTTGTGAGTTTTCCTCGTGGAAGTATCGACCCCAGCATGGCTGGACTTGCTGTGACGTATGGCCTGAATTTAAATGCACGCCTTTCACGGTGGATACTCAGCTTTTGCAAACTTGAAAATAAAATTATATCTATTGAGAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCCACAATTATTGAAGACTCTCACCCTCCATCCTCATGGCCGGAAAATGGGAACGATTGA 3462 0.4318 MPAPVVLVLIWKHVTFGLETWFKLSVLSCFYVLLVQVLVLGFDGVALIRGIRDVDVDLDLGLALLSLPLVQGLAWVVLSFSALHCKFKACERFPILLRVWWFVLFAICLCGLGVTGIKVFRSSEEQQPLLVEEEPGCLKVTPYSDAGLFSLTTLSWLNPLLSIGAKRPLELKDIPLVAPKDRSKTNYKVLNSNWERLKAENTSGQPSLALALLKSFWKEAACNAIFAGITTLVSYVGPYMISYFVDYLVGKEIFPHEGYVLAGIFFVAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRISSLAKQSHTSGEVVNYMAIDVQRVGDYSWYLHDMWMLPLQIVLALAILYKNVGIASIATLIATIISIVVTVPVARIQENYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRVKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFGTSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSGFLLEEELQEDATIVLPQGITNIAIEIKDGVFCWDPSESCRPTLSGISMKVEKGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSAAYVSQSAWIQSGTIEENILFGSPMDKAKGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYILTALANKTVIYVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPTHSSEDSDENLSLEASVMTSKKSICSANDIDSLAKEVQEGASTSDQKAIKEKKKAKRSRKKQLVQEEERIRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDLPKVTPSVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLKSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLSAIEWLCLRMELLSTFVFAFCMVLLVSFPRGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIEDSHPPSSWPENGND 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02915 1153 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 143 1152 - -
Pumo5g02915 1153 Gene3D - 517 627 IPR027417 -
Pumo5g02915 1153 Gene3D - 628 752 IPR027417 -
Pumo5g02915 1153 Pfam ABC transporter transmembrane region 836 1078 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo5g02915 1153 Pfam ABC transporter transmembrane region 225 489 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo5g02915 1153 Gene3D ABC transporter type 1, transmembrane domain 795 1134 IPR036640 GO:0005524|GO:0016020
Pumo5g02915 1153 Gene3D ABC transporter type 1, transmembrane domain 194 516 IPR036640 GO:0005524|GO:0016020
Pumo5g02915 1153 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 836 1106 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo5g02915 1153 ProSitePatterns ABC transporters family signature. 633 647 IPR017871 GO:0005524|GO:0016887
Pumo5g02915 1153 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 535 731 IPR003439 GO:0005524
Pumo5g02915 1153 Pfam ABC transporter 554 600 IPR003439 GO:0005524
Pumo5g02915 1153 FunFam ABC transporter C family member 10 204 517 - -
Pumo5g02915 1153 SUPERFAMILY ABC transporter transmembrane region 833 1133 IPR036640 GO:0005524|GO:0016020
Pumo5g02915 1153 Coils Coil 382 402 - -
Pumo5g02915 1153 CDD ABC_6TM_ABCC_D2 834 1128 IPR044726 GO:0140359
Pumo5g02915 1153 SMART AAA_5 563 716 IPR003593 GO:0016887
Pumo5g02915 1153 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 224 501 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo5g02915 1153 FunFam ABC transporter C family member 5 797 1134 - -
Pumo5g02915 1153 CDD ABCC_MRP_domain1 535 707 - -
Pumo5g02915 1153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 531 730 IPR027417 -
Pumo5g02915 1153 Coils Coil 791 811 - -
Pumo5g02915 1153 Pfam ABC transporter 629 660 IPR003439 GO:0005524
Pumo5g02915 1153 SUPERFAMILY ABC transporter transmembrane region 210 515 IPR036640 GO:0005524|GO:0016020
Pumo5g02915 1153 CDD ABC_6TM_ABCC_D1 222 509 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02915 Pumo-Chr5 76449624 76454856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02915 535 724 Calmodulin-binding Proteins AT2G36910 28.448 3.39e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02915 - - gmx:100814850 2035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02915 5 76449624 76454856 Pumo3g02501 3 37826659 37828422 PCT