Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02914 ATGAACTTCGGAAGCCATCTCAGTATCATACCACAAGATCCAACCTTATTTGAAGGGACCATTCGAGGCAATCTTGATCCTCTGGAGGAGCACTCAGATAAAGAGATTTGGGAGGCACTTGATAAGTCTCAGCTTGGAGAGGTTATCCGTGAGAAAGGACAACAGCTTGATACACCAGTTCTAGAAAATGGAGATAATTGGAGTGTAGGACAGCGACAACTTGTTGCTCTGGGCCGAGCTCTGCTGCAGCAGTCAAGAATTCTTGTACTGGACGAAGCAACAGCATCAGTTGATACCGCCACGGATAATCTTATCCAGAAGATTATCAGAAATGAGTTCAAGGACTGCACTGTGTGCACCATTGCACATCGTATACCTACTGTCATCGACAGTGATCAAGTTCTTGTGCTCAGTGATGGTCGAGTTGCAGAGTTTGATACTCCTACAAGACTATTAGAGGATAAGTCATCCATTTTTCTGAAGTTGGTGACTGAGTATTCATCACGTTCAAGTGGTATACCAGAATTTTAG 531 0.4388 MNFGSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEVIREKGQQLDTPVLENGDNWSVGQRQLVALGRALLQQSRILVLDEATASVDTATDNLIQKIIRNEFKDCTVCTIAHRIPTVIDSDQVLVLSDGRVAEFDTPTRLLEDKSSIFLKLVTEYSSRSSGIPEF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02914 176 Pfam ABC transporter 5 95 IPR003439 GO:0005524
Pumo5g02914 176 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 5 167 - -
Pumo5g02914 176 Gene3D - 2 166 IPR027417 -
Pumo5g02914 176 FunFam AGAP012735-PA 45 168 - -
Pumo5g02914 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 161 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02914 Pumo-Chr5 76447664 76449195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02914 6 163 Calmodulin-binding Proteins AT2G36910 30.625 2.10e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02914 - - gmx:100790550 327.791