Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo5g02911 | ATGGAATCCAAATCCAAATCCAAAATTCAACTCTTTTTCCTCACCCTTCTCCTCTTCACTCTCACCCTCCATGCAGAAACTCTTGGAACCTACATAGTTCAGCTACACCCTCATGGCACAACCAGCACTTCCTTCACCTCCAAGCTCAAATGGCACCTTTCATTCATCCAACAAACCATTTCCTCCGATGAGGACCCTTCTTCGCGCCTTCTCTACTCGTACCGTTCCGCCATGGACGGTTTTGCAGCTCAGCTAACTGAGTCTGAGCTTGAGTACCTCAAGAACTTGCCTGATGTTATCTCAATTAGGCTTGACAGCAAGCTCCAGATTCAGACCACTTACTCTTACAAGTTCTTGGGGCTGAACCCTGCTAGAGAAAATGGTTGGTACCAATCCGGTTTCGGCCGCGGAACCATAATTGGGGTGCTTGATACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCAAGGAATGCCCCCAGTTCCCAAGAAATGGAAGGGTATATGCCAATCTGGGAAGGCCTTTAACTCTTCCAATTGTAACCGAAAACTCATCGGTGCAAGGCTCTATGGAGAATCCATGTACCCGCTGAACCATCCAATGAGCAATGGTAAAGAACTTGAGCTGGTTTATTTGTCTGAAGGGGACACTGAGAGCCAATTTTGCCTCACAGGGTCTCTTCCAAGGGACAAAGTTAAGGGCAAAATGGTGGTCTGCGATCGAGGCGTCAATGGAAGAGCAGAAAAGGGCCAAGTGGTGAAGGAGGCCGGTGGTGTTGCTATGATCCTCACGAACACGGAGATAAACTTGGGAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGGTAGGATTTGATGAAGCAGTCACCTTGAAAGCTTACATAAACTCCACAGCAAGGCCTCTTGCTCGGATTGAATTCGGAGGAACTGTGATAGGGAAGTCTAGAGCTCCAACAGTGGCAAGATTTTCAGCCAGAGGACCAAGTTATACAAACCCTTCAATCCTCAAACCTGATGTTATAGCTCCAGGAGTGAACATCATTGCAGCATGGCCTCAGAACCTCGGTCCTACCGGCCTTCCAGAGGATACTAGGAGAGTTAACTTCTCTGTCATGTCTGGCACCTCAATGGCATGCCCTCATGTTAGTGGAATTGCTGCTCTTGTTCGCTCGGCTCACCCGAGATGGACCCCTGCAGCCATCAAATCTGCAATCATGACAACGGCCGAGGTAACCGACCACACCGGAAGGCCAATACTTGATGAAGACCAACCAGCTGGAGTTTTTGACATGGGAGCTGGACATGTGAATCCACAAAGAGCATTGAACCCTGGACTGGTGTATGACATTAGGCCAGATGACTATATCACCCACCTTTGCAGCCTTGGATACACAAGGTCAGAAATATTCAGCATCACACACAGAAATGTGAGTTGCAATGCAGTCATGAAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCATTCTCAGTAATTTTTAAGGGTGGGGTGAGGAGAAAGATGTTCAGCAGGAGACTAACAAATGTGGGAAGTGCTAACTCCATCTACTCAGTGGAGGTTGTGGCACCTGAAGGAGTAAAAGTGATAGTGAAACCCAAGCGGTTGGTATTCAAACAAGTGAATCAAAGCTTGAGTTACAGGGTGTGGTTTATATCAAGAAAAAGGGTTAAAAGAGGTGATGATTTGGTGACCTATGCAGAAGGGAGTTTGACATGGGTACACTCACAAAATGGTTCCCACAGGGTTAGAAGCCCGGTAGCAGTGACTTGGAAGTCAAAGTAG | 1812 | 0.4735 | MESKSKSKIQLFFLTLLLFTLTLHAETLGTYIVQLHPHGTTSTSFTSKLKWHLSFIQQTISSDEDPSSRLLYSYRSAMDGFAAQLTESELEYLKNLPDVISIRLDSKLQIQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQSGKAFNSSNCNRKLIGARLYGESMYPLNHPMSNGKELELVYLSEGDTESQFCLTGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKEAGGVAMILTNTEINLGEDSVDVHVLPATLVGFDEAVTLKAYINSTARPLARIEFGGTVIGKSRAPTVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDTRRVNFSVMSGTSMACPHVSGIAALVRSAHPRWTPAAIKSAIMTTAEVTDHTGRPILDEDQPAGVFDMGAGHVNPQRALNPGLVYDIRPDDYITHLCSLGYTRSEIFSITHRNVSCNAVMKMNRGFSLNYPSFSVIFKGGVRRKMFSRRLTNVGSANSIYSVEVVAPEGVKVIVKPKRLVFKQVNQSLSYRVWFISRKRVKRGDDLVTYAEGSLTWVHSQNGSHRVRSPVAVTWKSK | 603 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo5g02911 | 603 | Gene3D | Peptidase S8/S53 domain | 316 | 458 | IPR036852 | GO:0004252|GO:0006508 | |
| Pumo5g02911 | 603 | Gene3D | - | 213 | 315 | - | - | |
| Pumo5g02911 | 603 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 208 | 598 | IPR045051 | - | |
| Pumo5g02911 | 603 | Gene3D | - | 462 | 600 | - | - | |
| Pumo5g02911 | 603 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 113 | 445 | - | - | |
| Pumo5g02911 | 603 | Pfam | PA domain | 209 | 292 | IPR003137 | - | |
| Pumo5g02911 | 603 | Pfam | Peptidase inhibitor I9 | 30 | 110 | IPR010259 | - | |
| Pumo5g02911 | 603 | Pfam | Subtilase family | 319 | 424 | IPR000209 | GO:0006508|GO:0008236 | |
| Pumo5g02911 | 603 | Pfam | Fibronectin type-III domain | 494 | 598 | IPR041469 | - | |
| Pumo5g02911 | 603 | FunFam | subtilisin-like protease SBT1.5 | 184 | 315 | - | - | |
| Pumo5g02911 | 603 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 20 | 110 | IPR037045 | - | |
| Pumo5g02911 | 603 | SUPERFAMILY | Subtilisin-like | 93 | 451 | IPR036852 | GO:0004252|GO:0006508 | |
| Pumo5g02911 | 603 | PRINTS | Subtilisin serine protease family (S8) signature | 376 | 392 | IPR015500 | - | |
| Pumo5g02911 | 603 | PRINTS | Subtilisin serine protease family (S8) signature | 135 | 154 | IPR015500 | - | |
| Pumo5g02911 | 603 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 377 | 387 | IPR023828 | - | |
| Pumo5g02911 | 603 | FunFam | Subtilisin-like protease SBT1.9 | 19 | 111 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo5g02911 | Pumo-Chr5 | 76430766 | 76433215 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo5g02911 | 187 | 602 | Subtilisin-like Serine Gene Family | AT1G04110 | 68.029 | 0.0 | 609 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo5g02911 | - | - | gmx:100790205 | 807.364 |