Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02909 ATGAAGAAGAACAAGATGCAAATGAAAATCCAGATTTTCATCTTCTTCTGTTGCATTGGTTGTTTCTCTTATGGTTTTGCTGCTGCTGCCGCAAACGATGAAGTATCAGCTTTGCTTTCCATAAAAGCAGGTCTTGTTGATCCGTTGAACGCCCTTCAGGATTGGAAACTGCATGACAAAGCACCAGGAAAGGATGCAGCTCATTGTAACTGGACTGGCATCAAATGCAACTCAGCTGGAGCTGTAGAAAAGCTTGATCTCTCCCACAAGAATCTCAGTGGCAGAGTATCCAATGATATACAAAGACTTAAAAGTCTTACTTCTCTCAACTTGTGTTGCAATGCCTTTTCTACACCATTGCCAAAATCCATAGCCAATCTCACCACACTCAACAGCCTTGATGTAAGCCAAAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAGGGCATGGAGACTTATGGCCTTAAATGCATCCAGCAATGAGTTTTCAGGCTCTCTTCCTGAGGACCTTGGAAATGCCTCTTCCTTAGAGATGCTTGATCTCAGAGGCAGCTTCTTTGTAGGGTCAGTTCCAAAATCATTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCTGGGAACAATCTCACTGGTAAAATTCCTGGAGAGCTGGGACAACTTTCATCACTGGAGTATATGATCCTTGGATATAATGAATTTGAAGGTGGCATTCCAGAAGAGTTTGGCAACCTCACCAATCTTAAGTATCTTGATTTAGCAGTAGCCAATCTTGGTGGTGAGATTCCAGGTGGATTGGGAGAGCTCAAGTTGTTGAATACAGTTTTCTTGTACAACAACAATTTTGAAGGCAGAATTCCACCAGCAATTGGCAACATGACCTCTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGAAAAATTCCAGCTGAAATAAGTCAGCTGAAGAATTTGAAACTTCTCAACTTGATGGGTAACAAGCTGTCAGGTCCTGTGCCTTCTGGCTTTGGAGATTTGCCACAACTGGAGGTACTTGAGCTATGGAACAATTCCTTGTCAGGACCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAATGGTTGGATGTGTCATCCAATTCACTCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGCAATCTCACCAAGCTCATACTATTCAACAATGCCTTCTCTGGTCCATTTCCATCAAGCCTATCAATGTGTCCTTCACTTGTTCGTGTTCGAATTCAGAACAATTTTCTTTCTGGGACAGTTCCTGTGGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTTTCTGGTGGAATTCCACATGACATTGCTTCTTCCACATCCCTTTCCTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCTTCCACTGTCCTTTCCATTCCAAACCTGCAAGCTTTCATGGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGACCAATTCCAGGACTGTCCATCACTTGGAGTTCTTGATCTCTCTTCAAATCATCTATCTGGAAGCATTCCAGCAAGCATTGCTTCATGTCAGAAGTTGGTAAATTTGAATCTCCAAAACAACCAATTGACTGGTGAAATCCCAAAAGCATTAGCTAAGATGCCTACACTTGCCATGCTTGATCTTTCCAACAATTCTCTGACAGGCCAAATACCTGAAAGCTTTGGAATTTCTCCAGCTCTGGAAGCACTCAATGTCTCATACAATAAGCTAGAAGGTCCAGTCCCAGAAAATGGAATACTAAGAACTATAAACCCAAATGATCTTCTGGGTAATGCTGGCCTATGTGGTGGTGTCCTCCCTTCCTGTGACCAAAACTCTGCATACTCTTCAAGGCACGGAAGCTTGCATGCAAAGCACATTATTACAGCATGGATCACTGGAATATCTTCAATCCTAGTCATCGGGATTGCGATTTTGGTAGCAAGATCTTTGTACATGAGGTGGTACACCGACGGGTTTTGCTTCCGAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCTTGGAGATTGATGGCATTTCAGAGGCTTGGTTTTACAAGTACTGACATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGCATGGGAGCCACAGGGGTTGTTTATAAGGCTGAGGTACCACAATCAAATACAGTTGTGGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTAGGAAGCAGTGATGACCTTGTGGGAGAGGTGAACCTTTTAGGGAGGCTCAGGCATAGGAACATTGTTCGACTATTAGGATTTCTTCACAATGACATTGATGTGATGATAGTTTATGAATTCATGCACAATGGCAACCTGGGAGAAGCCTTGCATGGTAGACAAGCAACAAGACTGCTTGTAGACTGGGTTTCGCGGTACAACATAGCTCTAGGAGTTGCACAAGGACTTGCTTATCTCCATCATGATTGTCACCCACCCGTTATCCATCGAGACATCAAGTCAAATAACATATTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCCGGAAGAATGAAACAGTCTCCATGGTTGCTGGATCCTATGGCTACATTGCCCCTGAATATGGATATGCCTTGAAGGTGGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTGACAGGAAAGAGGCCATTAGATCCAGACTTTGGAGAGTCAATAGACATAGTAGGGTGGATTAGAATGAAGATTAGAGACAACAAATCTCTAGAAGAAGCATTAGACCCCAGTGTAGGAAACAGCAAGCATGTTCTAGAAGAGATGCTTTTAGTTCTGAGAATAGCAATTATTTGCACTGCCAAGCTCCCCAGGGACAGACCAACCATGAGGGATGTCATAATGATGCTTGAAGAGGCAAAGCCTCGGAGAAAGAGCAGTAGCAATAGCAACGATGCAGCTAACAACAAAGAGACACCAGTTTTTAGCACATCACCAGTTAATAATAGCCTTGTGTAG 3075 0.4273 MKKNKMQMKIQIFIFFCCIGCFSYGFAAAAANDEVSALLSIKAGLVDPLNALQDWKLHDKAPGKDAAHCNWTGIKCNSAGAVEKLDLSHKNLSGRVSNDIQRLKSLTSLNLCCNAFSTPLPKSIANLTTLNSLDVSQNFFIGDFPLGLGRAWRLMALNASSNEFSGSLPEDLGNASSLEMLDLRGSFFVGSVPKSFSNLHKLKFLGLSGNNLTGKIPGELGQLSSLEYMILGYNEFEGGIPEEFGNLTNLKYLDLAVANLGGEIPGGLGELKLLNTVFLYNNNFEGRIPPAIGNMTSLQLLDLSDNMLSGKIPAEISQLKNLKLLNLMGNKLSGPVPSGFGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFSGPFPSSLSMCPSLVRVRIQNNFLSGTVPVGLGKLGKLQRLELANNSLSGGIPHDIASSTSLSFIDLSRNKLHSSLPSTVLSIPNLQAFMVSNNNLEGEIPDQFQDCPSLGVLDLSSNHLSGSIPASIASCQKLVNLNLQNNQLTGEIPKALAKMPTLAMLDLSNNSLTGQIPESFGISPALEALNVSYNKLEGPVPENGILRTINPNDLLGNAGLCGGVLPSCDQNSAYSSRHGSLHAKHIITAWITGISSILVIGIAILVARSLYMRWYTDGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGVVYKAEVPQSNTVVAVKKLWRTGTDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLHNDIDVMIVYEFMHNGNLGEALHGRQATRLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDPDFGESIDIVGWIRMKIRDNKSLEEALDPSVGNSKHVLEEMLLVLRIAIICTAKLPRDRPTMRDVIMMLEEAKPRRKSSSNSNDAANNKETPVFSTSPVNNSLV 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02909 1024 FunFam MDIS1-interacting receptor like kinase 1 713 797 - -
Pumo5g02909 1024 Gene3D Ribonuclease Inhibitor 186 282 IPR032675 -
Pumo5g02909 1024 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Pumo5g02909 1024 MobiDBLite consensus disorder prediction 999 1024 - -
Pumo5g02909 1024 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 187 287 - -
Pumo5g02909 1024 Gene3D Ribonuclease Inhibitor 283 390 IPR032675 -
Pumo5g02909 1024 Gene3D Phosphorylase Kinase; domain 1 713 797 - -
Pumo5g02909 1024 MobiDBLite consensus disorder prediction 990 1024 - -
Pumo5g02909 1024 Pfam Leucine rich repeat N-terminal domain 31 77 IPR013210 -
Pumo5g02909 1024 ProSitePatterns Protein kinases ATP-binding region signature. 719 743 IPR017441 GO:0005524
Pumo5g02909 1024 Pfam Protein kinase domain 715 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02909 1024 SMART LRR_typ_2 343 367 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 295 319 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 247 271 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 199 223 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 511 535 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 487 510 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 103 127 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 439 463 IPR003591 -
Pumo5g02909 1024 SMART LRR_typ_2 559 583 IPR003591 -
Pumo5g02909 1024 Gene3D Transferase(Phosphotransferase) domain 1 798 1016 - -
Pumo5g02909 1024 Pfam Leucine rich repeat 488 548 IPR001611 GO:0005515
Pumo5g02909 1024 Pfam Leucine rich repeat 274 332 IPR001611 GO:0005515
Pumo5g02909 1024 Pfam Leucine rich repeat 416 476 IPR001611 GO:0005515
Pumo5g02909 1024 Gene3D Ribonuclease Inhibitor 391 632 IPR032675 -
Pumo5g02909 1024 ProSiteProfiles Protein kinase domain profile. 713 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02909 1024 SUPERFAMILY Protein kinase-like (PK-like) 709 990 IPR011009 -
Pumo5g02909 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Pumo5g02909 1024 FunFam MDIS1-interacting receptor like kinase 1 798 1008 - -
Pumo5g02909 1024 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 31 186 - -
Pumo5g02909 1024 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 181 984 - -
Pumo5g02909 1024 SUPERFAMILY L domain-like 68 359 - -
Pumo5g02909 1024 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 370 632 - -
Pumo5g02909 1024 SUPERFAMILY RNI-like 279 598 - -
Pumo5g02909 1024 SMART serkin_6 713 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02909 Pumo-Chr5 76384218 76387720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02909 11 1019 Receptor kinase-like Gene Family AT1G08590 59.883 0.0 1173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo5g02909 Pkinase 9.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02909 - - gmx:100811284 1866.66