Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02854 ATGGCCAGGGAGCAAATTCAGGTTCTAAATGCACTTGATGTGGCAAAAACACAATGGTACCATTTCACTGCAATCATCATTGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTTACAAAGTTGCTTGGCCGCATATACTATCACGTTGATGGCGCACCAAAGCCCGGAACATTGCCTCCCAATGTATCAGCTGCTGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGCCAGCTTTTCTTTGGTTGGCTTGGTGATAAGATGGGAAGGAAAAAAGTCTATGGAATGACTCTGATGCTGATGGTAATATGCTCCATCGGTTCCGGCCTTTCATTTGGACACAGTGCAAAATCCGTGATAGCAACTCTTTGCTTCTTCCGGTTCTGGCTTGGATTTGGTATTGGTGGAGACTATCCTCTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGCGGTGCCTTCATTGCTGCAGTCTTTGCCATGCAGGGTTTTGGAATTTTGGCAGGTGGTATATTTGCAATTATAATTTCAACTGCATTCAAGGAAAGGTTTGATGCTCCACCATATGAGGTTGATCCAGCTGGCTCAACTGTTGCACAAGCAGACTACATTTGGAGGATAATTGTGATGGTGGGAGCACTCCCAGCTGCATTGACTTACTACTGGAGGATGAAGATGCCGGAAACTGCCCGTTATACTGCTCTAGTTGCCAAGAACACAAAGCAGGCTGCGGCAGATATGTCCAAGGTTCTGCAGGTTGATATTCAAGCTGAACCGCAGAAAGAAGAGACGGCAAAGTCATATGGCTTGTTCTCGAAGGAGTTCCTCAGTCGCCATGGACTGCACCTACTTGGTACAGCAAGCACATGGTTCTTGCTTGATATTGCATTCTATAGTCAAAATCTTTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATACCTCCTGCAAAAACCATGAATGCCATTGAGGAGGTTTACAGAATTGCAAGGGCTCAAACACTTATTGCTCTATGCAGTACAGTTCCTGGCTACTGGTTCACAGTGGCTTTCATTGACAAGATAGGAAGATTTGCTATCCAATTGATGGGGTTCTTCTTTATGACTGTCTTCATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGATAACCGGATAGGATTTGTGGCCATCTATTCATTGACCTTCTTCTTCGCAAATTTTGGGCCTAATGCCACCACATTTGTGGTGCCGGCAGAGATTTTCCCTGCTAGATTCAGATCTACTTGCCATGGAATCTCATCAGCATCTGGGAAGCTTGGGGCTATAGTTGGTGCATTTGGGTTCTTGTACTTGGCACAAAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATGCACTTATTGTCTTGGGTGTGGTTAACATTTTAGGCTGCTTCTTTACTTTCTTGGTGCCTGAGGCAAAGGGAAGATCATTGGAGGATATGTCAGGTGAGAATGATGAGGAAGTTGGAACCAGGGAAGAGTCAGAGCTGTCACATTCTCACAGCAACAACAGAACTGTTCCATATGTTTAG 1617 0.4477 MAREQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVICSIGSGLSFGHSAKSVIATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISTAFKERFDAPPYEVDPAGSTVAQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTKQAAADMSKVLQVDIQAEPQKEETAKSYGLFSKEFLSRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVAIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNALIVLGVVNILGCFFTFLVPEAKGRSLEDMSGENDEEVGTREESELSHSHSNNRTVPYV 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02854 538 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
Pumo5g02854 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 503 IPR020846 GO:0022857
Pumo5g02854 538 NCBIfam phosphate:H+ symporter 11 512 IPR004738 GO:0005315|GO:0006817|GO:0016020
Pumo5g02854 538 SUPERFAMILY MFS general substrate transporter 12 510 IPR036259 -
Pumo5g02854 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 501 - -
Pumo5g02854 538 Pfam Sugar (and other) transporter 26 510 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo5g02854 538 CDD MFS_PhT 25 502 - -
Pumo5g02854 538 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Pumo5g02854 538 MobiDBLite consensus disorder prediction 507 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02854 Pumo-Chr5 75791344 75794863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02854 1 511 Inorganic Solute Cotransporters AT2G38940 84.109 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02854 K08176 - gmx:100819445 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02854 5 75791344 75794863 Pumo5g02854 5 75791344 75794863 ECH
Pumo5g02854 5 75791344 75794863 Pumo3g03614 3 76256144 76258344 PCT
Pumo3g02450 3 37294773 37296647 Pumo5g02854 5 75791344 75794863 PCT