Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02848 ATGGGTATATCAAGGACTTTCAAGTCTATGATCCGCAGAGTGGGGAGGATAATGATTGAACTACAAGGTAGGATTAATGATTGCAAGGCCCTTAAGTACCGAAAGGACCTTAACGCAAGGGATATTGAAACCTACAGATTGCAGGCTTTTGCAACAAATCAGTGGGGTTGGGTTGTGATTACAACTACTGATGGAACTCTGGATCACGAAGAGGCGATTAAAAGGAATCAATAA 234 0.4188 MGISRTFKSMIRRVGRIMIELQGRINDCKALKYRKDLNARDIETYRLQAFATNQWGWVVITTTDGTLDHEEAIKRNQ 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02848 77 PANTHER 40S RIBOSOMAL PROTEIN S15A 12 76 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo5g02848 77 Gene3D - 26 77 - -
Pumo5g02848 77 SUPERFAMILY Ribosomal protein S8 12 76 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02848 Pumo-Chr5 75708137 75709922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02848 13 76 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 67.188 1.23e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02848 K02957 - gmx:100792186 105.916