Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02815 ATGGAATCAGTTTTCAGTTTTGCCAGGTTGAATTGTTTGTTTTTGGTGATGCAGGTTTTGCTAAGAGACCCAACGGATGATGACGTTGTGCCAATTGTTGAGGAACTTCGGCGACGGTTACCCAAAGTAAGTGGTGCTGGGCTAGGCCAAGGAGAAGAAGAAGCGTGTGCTCAAGATGGTGAAGGTGGAGAAGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAGGCAATTTGTAGTTTCCTTGATGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTGACCTCTAAGATCAGCAGTCGTAATTTGGATAGAGTGCGAAAATTGAAATGTGCAATGACGAGGTTGACAATTCGAGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGACGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTTGGCTGTTTCATCCTCTCCAACAAGTAGCTCTGATGCTCCCTACTGGCTTTATGGGTCTCCAAATACAGGTTCAAATAGACACAAATCAAGCAGAGCAAGTGGAACAACAGTCCAAAGGGAGAATGATGTTGAGGAGCTCGAAATGTTACTTGAGGCCTATTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAATATATAGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAATCAACTGATTCAGCTAGAGCTCTTCATTAGTGCCGGGACTGTCTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATACCATATACATGGAAAGCACCAGGCCACGAATATGTGTTTAAATGGGTGGTGATCTTTGGCGGAACGGTTTGTGCATCCTTGTTTATATCCATAGTATCTCATGCCCGACGCAAAGGCCTCGTTGGGTCTTGA 951 0.4259 MESVFSFARLNCLFLVMQVLLRDPTDDDVVPIVEELRRRLPKVSGAGLGQGEEEACAQDGEGGEENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTIRVQKIRDELENLLDDDDDMADLYLSRKLAVSSSPTSSSDAPYWLYGSPNTGSNRHKSSRASGTTVQRENDVEELEMLLEAYFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKAPGHEYVFKWVVIFGGTVCASLFISIVSHARRKGLVGS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02815 316 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 313 IPR039204 -
Pumo5g02815 316 Pfam CorA-like Mg2+ transporter protein 202 303 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pumo5g02815 316 CDD Mrs2_Mfm1p-like 19 313 IPR039204 -
Pumo5g02815 316 Gene3D Magnesium transport protein CorA, transmembrane region 31 245 - -
Pumo5g02815 316 MobiDBLite consensus disorder prediction 45 64 - -
Pumo5g02815 316 Coils Coil 116 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02815 Pumo-Chr5 75265720 75268335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02815 4 289 MRS2 Gene Family AT5G64560 70.790 1.24e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02815 K16075 - gmx:100799368 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02815 5 75265720 75268335 Pumo5g02815 5 75265720 75268335 ECH