Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02796 ATGTCGAATAGCCAAAATCTGAAATATGATGGTAGTTCATTTCTCATTGACATAACCACCACTGTCAATTACACCATCAAAACAGCCAAAAGAAGATGGCGTTTTGCATACACAGCGATTTATTCTAGAAGGGTCATGCTTGCCTTGGCCAAAGAAGTAATATCTAAGAGAAATACAAACACTCATCCTTATTCTAAACTCTTCCAAACTCAGTCTTCCGGATCCGGCAGCACTCTTGATATCATTGAGCCCCTGATTCCCCAACATGGGACCAATCATTATTCTTTGGTTCCTGATGTTGACAAGGCCAGACTTGCTAGCATGGTAAAGGACAAAAACTTGGAAGCCTTTACTGAGTTTGGAGGAGTTGAAGGTGTTGCAAATATTCTTGGAACCATTCCAGCAAAGGGAATCAGTGGCGACGATGATGATGTTGCGAAACGGCGTGAATTGTTTGGATCAAACACTTACCCGAGGCCACCACCCAAGGTATTTATAAGCTTTGTAGTGGAGGCTTTCAATGACACTACTATTCTGATCCTTCTTGTTTGTGCTGGCCTTTCCCTTGGTTTTGGCATAAAAGAACATGGGCCAGGGGAAGGATGGTATGAAGGAGGGAGTATAATTGTAGCAGTGTTTCTGGTCGTGGTTGTCACTGCACTCAGCAACTTCAGACAAGAGAGACAGTTTGACAAATTGTCTAAGATAAGCAACAACATCAAAGTTGACGTTGTGAGAAATGGAAGGCCGCAGCAGATATCCATCTTTGATGTACTTGTGGGGGAAATTGTGTCCCTTAAGATTGGTGATCAAATTCCAGCTGATGGATTGTTCTTAAGTGGCCATTCTTTGCAAGTGGATGAATCAAGTATGACAGGTGAGAGCGACCATGTAGAAATTGAGCCTTCAAAGAGCCCCTTTTTGTTGTCAGGTGCAAAGGTTGTGGATGGCTATGCTCTTATGCTTGTGACATCTGTGGGAACCAATACAGCATGGGGTGAAATGATGAGCTCAATATCGCGAGACACCAAGGAAAGGACACCATTACAGGCTCGCCTTGACAAGTTAACTTCTTCTATAGGAAAGGTAGGCCTCACAGTCGCTTTTCTTGTTCTCATAGTCTTGTTAATTCGTTATTTCACTGGAAACACGGAAGATGATAAAGGGAATAAGAAATTCCAGGGGAGTAAAACCGATGTAAATGACGTTTTCAATGCGGTTGTGCGAATTGTTGCTGTTGCTGTCACCATTGTGGTTGTGGCAATCCCTGAGGGTCTGCCATTGGCTGTCACTCTCACACTTGCTTACTCCATGAAAAGAATGATGGCAGACCAAGCAATGGTGAGGAAACTTTCTGCTTGTGAAACAATGGGGTCAGCAACAGTTATTTGCACAGATAAAACTGGCACCTTAACTTTGAATCAAATGAGAGTCACCAAGTTTTGGCTTGGCCTAGAAAATATTATGGAAAACTTTTCCAATGCAATGGCTCCTAATGTTCTGGAGTTATTTCACCAAGGAGTTGGCCTCAACACAACTGGCAGTATCTATAAACCTTCATCAGAATCTGATCCTGAAATTTCTGGTAGCCCAACAGAGAAAGCTATACTCTTGTGGGCCGTGTCAGATTTAGGCATGGACATGGATGAACTGAAGCGCACACATGAAGTTCTCCATGTAGAAACGTTTAACTCGGAGAAGAAACGAAGTGGCATTGCAATAAGGAAGACGTCCAACAACACAGTTCACGTGCATTGGAAAGGTGCTGCAGAGATTATACTTGCAATGTGTTCTAATTACATTGACAATAACGGCATAGAGAAGTTCCTTGATGAAGAACGGAGTAAACTTGAGAAGATAATTCAAGGCATGGCTGCTAGTAGCCTTAGATGTATTGCTTTTGCTCACATGCAGATTTCAGAAGATATTGATTATAACGATAAAGAGAAAGCGCATCAAATCCTTAGAAAAGATAGCTTGACATTGCTAGGTATTGTTGGCCTCAAGGATCCATGCCGACCTGACGTCAAGAAGGCAGTGGAAACCTGTAAACTTGCAGGTGTTGGTATCAAGATGATCACAGGAGATAACATATTCACTGCAAAGGCCATAGCAACAGAATGCGGAATATTAGACCTTGATGGCAATGTGAATGCAGGAGAAGTGGTGGAAGGTGTGGAATTCAGAAACTACACGGAGGAAGAGAGAATGGAGAAAGTTGAGAAGATCCGTGTGATGGCAAGATCATCCCCTTTGGACAAACTTTTGATGGTGCAATGCTTGAAAAAGAAAGGCCACGTTGTTGCAGTCACGGGAGATGGCACAAATGATGCACCTGCTCTAAAAGAAGCTGATATTGGTCTCTCTATGGGGATCCAAGGAACTGAAGTTGCCAAGGAGAGTTCTGACATTGTGATCTTAGATGACAACTTCAATTCTGTGGCCACTGTTCTAAGGTGGGGGCGATGTGTTTATAACAACATCCAAAAATTCATCCAGTTTCAACTAACCGTGAATGTTGCAGCTCTAGTGATCAATTTTATTGCAGCAGTTTCTTCGGGAGATGTTCCCCTAACAACAGTTCAACTATTATGGGTAAATCTCATTATGGATACTCTAGGAGCTTTGGCACTGGCTACAGAAAGGCCTACAAAGGAGTTAATGGAGAAAAAGCCAGTGGGTAGAACTGAGCCTCTTATTACTAGTATTATGTGGAGAAACCTTTTAGCTCAAGCTTTATATCAGATTGCTGTTCTCTTGGTTTTACAATTCAATGGAGAGTCAATCTTCAATGTGAATGGGAAGGTAAAGGATACTCTAATTTTTAATACTTTTGTTCTCTGCCAAGTTTTCAACGAGTTCAACTCTAGAAGTATGGAGAAACTTAATGTATTTCAAGGCATTCTCAGAAACCACTTGTTTCTTGGAATTGTGGGGATCACAATTGTTCTTCAAATTGTGATGGTGGAACTCCTAAGGAAGTTTGCTGATACGGAGAGATTAACATGGGAGCAATGGGGAATTTGTATTGGAATTGCAGCTGTGTCATGGCCAATTGCTTGGTTTACAAAGCGCGTACCTGTTTCTTCAGACGTTAAGTGGGTAAAATTATTGGTCTTCAAGATTAAGCATTTGTTTTAA 3141 0.4187 MSNSQNLKYDGSSFLIDITTTVNYTIKTAKRRWRFAYTAIYSRRVMLALAKEVISKRNTNTHPYSKLFQTQSSGSGSTLDIIEPLIPQHGTNHYSLVPDVDKARLASMVKDKNLEAFTEFGGVEGVANILGTIPAKGISGDDDDVAKRRELFGSNTYPRPPPKVFISFVVEAFNDTTILILLVCAGLSLGFGIKEHGPGEGWYEGGSIIVAVFLVVVVTALSNFRQERQFDKLSKISNNIKVDVVRNGRPQQISIFDVLVGEIVSLKIGDQIPADGLFLSGHSLQVDESSMTGESDHVEIEPSKSPFLLSGAKVVDGYALMLVTSVGTNTAWGEMMSSISRDTKERTPLQARLDKLTSSIGKVGLTVAFLVLIVLLIRYFTGNTEDDKGNKKFQGSKTDVNDVFNAVVRIVAVAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFWLGLENIMENFSNAMAPNVLELFHQGVGLNTTGSIYKPSSESDPEISGSPTEKAILLWAVSDLGMDMDELKRTHEVLHVETFNSEKKRSGIAIRKTSNNTVHVHWKGAAEIILAMCSNYIDNNGIEKFLDEERSKLEKIIQGMAASSLRCIAFAHMQISEDIDYNDKEKAHQILRKDSLTLLGIVGLKDPCRPDVKKAVETCKLAGVGIKMITGDNIFTAKAIATECGILDLDGNVNAGEVVEGVEFRNYTEEERMEKVEKIRVMARSSPLDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMEKKPVGRTEPLITSIMWRNLLAQALYQIAVLLVLQFNGESIFNVNGKVKDTLIFNTFVLCQVFNEFNSRSMEKLNVFQGILRNHLFLGIVGITIVLQIVMVELLRKFADTERLTWEQWGICIGIAAVSWPIAWFTKRVPVSSDVKWVKLLVFKIKHLF 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02796 1046 PRINTS H+-transporting ATPase (proton pump) signature 803 828 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g02796 1046 PRINTS H+-transporting ATPase (proton pump) signature 771 787 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g02796 1046 PRINTS H+-transporting ATPase (proton pump) signature 617 635 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g02796 1046 SUPERFAMILY Calcium ATPase, transduction domain A 239 338 IPR008250 -
Pumo5g02796 1046 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 1027 IPR023298 -
Pumo5g02796 1046 Gene3D - 461 816 IPR023214 -
Pumo5g02796 1046 SMART Cation_ATPase_N_a_2 119 193 IPR004014 -
Pumo5g02796 1046 Gene3D - 474 671 IPR023299 GO:0000166
Pumo5g02796 1046 NCBIfam calcium-translocating P-type ATPase, PMCA-type 113 1028 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo5g02796 1046 Gene3D - 142 340 - -
Pumo5g02796 1046 FunFam Calcium-transporting ATPase 666 816 - -
Pumo5g02796 1046 Pfam Cation transporter/ATPase, N-terminus 121 188 IPR004014 -
Pumo5g02796 1046 SFLD Haloacid Dehalogenase 446 824 - -
Pumo5g02796 1046 Pfam haloacid dehalogenase-like hydrolase 462 785 - -
Pumo5g02796 1046 SFLD p-type atpase 446 824 IPR044492 -
Pumo5g02796 1046 Pfam E1-E2 ATPase 240 442 - -
Pumo5g02796 1046 NCBIfam HAD-IC family P-type ATPase 741 851 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g02796 1046 NCBIfam HAD-IC family P-type ATPase 406 488 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g02796 1046 NCBIfam HAD-IC family P-type ATPase 208 381 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g02796 1046 SUPERFAMILY HAD-like 462 876 IPR036412 -
Pumo5g02796 1046 FunFam Calcium-transporting ATPase 474 671 - -
Pumo5g02796 1046 PANTHER CATION TRANSPORTING ATPASE 89 1028 - -
Pumo5g02796 1046 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 470 676 IPR023299 GO:0000166
Pumo5g02796 1046 FunFam Calcium-transporting ATPase 788 1030 - -
Pumo5g02796 1046 CDD P-type_ATPase_Ca_PMCA-like 145 904 - -
Pumo5g02796 1046 PRINTS P-type cation-transporting ATPase superfamily signature 795 807 - -
Pumo5g02796 1046 PRINTS P-type cation-transporting ATPase superfamily signature 287 301 - -
Pumo5g02796 1046 PRINTS P-type cation-transporting ATPase superfamily signature 664 675 - -
Pumo5g02796 1046 PRINTS P-type cation-transporting ATPase superfamily signature 771 790 - -
Pumo5g02796 1046 PRINTS P-type cation-transporting ATPase superfamily signature 464 478 - -
Pumo5g02796 1046 PRINTS P-type cation-transporting ATPase superfamily signature 686 696 - -
Pumo5g02796 1046 ProSitePatterns E1-E2 ATPases phosphorylation site. 466 472 IPR018303 -
Pumo5g02796 1046 Pfam Cation transporting ATPase, C-terminus 856 1025 IPR006068 -
Pumo5g02796 1046 Gene3D - 171 1017 - -
Pumo5g02796 1046 FunFam Calcium-transporting ATPase 216 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02796 Pumo-Chr5 74995648 74999776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02796 29 1029 Primary Pumps ATPases AT3G63380 70.149 0.0 1370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02796 K01537 - gmx:100790034 1891.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02796 5 74995648 74999776 Pumo5g02796 5 74995648 74999776 ECH