Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02786 ATGGGTAACGCAGACTATGCATACCCTTCGGGTATGAACGTGGAGTGCGTGCACCGAGTGGCCATTCCACCCCCACAACCCTTCTTCAAGTCCCTCAAGTACTCTTTGAAAGAGACCTTTTTCCCAGATGACCCCTTTAGGAAGTTCAAGAACCAGCCAGCCTCTAAGAGGTTCGTGCTTGGCCTTCAGTACTTCTTCCCCATCTTCGAGTGGGGACCTAAATACACCCTCCACTTCCTGAAATCAGACCTCATAGCTGGCATCACCATTGCTAGCTTGGCTATCCCTCAAGGCATCAGTTATGCCAAGCTAGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTTATACCGCCATTGATTTATGCAATGATGGGAAGCTCAAGGGATTTGGCAGTGGGAACTGTGGCGGTTGGATCGCTTCTGATGGCTTCCATGTTGGGTCGAGTGGTCAATTTCAATGAGAACCCAAAGCTTTTTCTCCACTTGGCTTTCACTGCTACCTTCTTTGCTGGAGTTTTGCAGGCATCACTCGGTCTCTTCAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAGCCATAGTAGGGTTCATGGGTGGAGCAGCTACAGTGGTTTGTCTGCAACAGCTAAAATCAATTCTTGGCCTTGAGCATTTTACCCACGAGGCCGATCTCGTCTCAGTAATGCGCTCTGTTTTTTCCCAAACTCATGAGTGGAGGTGGGAAAGCGCTTTGCTGGGTTGTTGCTTTATTTTCTTCCTCCTCGTCACAAGATACTTCAGCAAACGACAGCCAAAGTTCTTCTGGGTGTCAGCAATGGCACCACTGGCGTCCGTCATACTGGGAAGTCTGCTGGTTTATTTCACACACGCTGAGAAGCATGGAGTTCAAGTGATAGGAAATTTGAAGAAGGGGCTGAATCCACCTTCGGTGACGGATTTGGTGTTTGTGTCGCCTTATATGGGCACTGCCATAAAAACTGGACTTATCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAGAATTATCATATTGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTCGGTTCCTTCACCTCTTGCTATCTCACCACAGGACCATTTTCGCGTTCAGCAGTGAACTATAATGCTGGGTGCAAGACTGCTGCATCAAACATTGTAATGGCAATAGCAGTGATGTTGACATTGTTATTCTTAACCCCCTTGTTCCATTTCACTCCCTTGGTGGTGCTATCGTCCATTATTGTGTCAGCAATGCTCGGGGTCATAGATTATCAAGCAGCCATTCATTTGTGGAAAATTGACAAATTTGATTTTTTAGTGTGCTTCAGTGCTTATGTTGGCGTAGTCTTTGGGAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTACTTCGAGTACTTTTATTTATTGCAAGGCCAAGGACATTTCTTTTAGGCAACATTCCAAATTCTGCAGTATACAGAAATGTGGAGCAATATCCAAATGCAAACCATATTCCTGGAATCCTAATTCTTGAGATTGATGCACCCATCTACTTTGCCAATGCAAGCTATTTAAGGGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATCAAATCTACAGGGCAAACCAGTTTGCAGTATGTCATAATGGATATGACTGCTGTTGCGAACATTGATACAAGCGGAATAAGCATGCTTGAAGAGTGCAAGAAGACTGTTGACAGAAGAGGGTTACAACTTGCTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTGGGGCATAAATGGGTCTATCTGACAGTTGAAGAAGCTGTTGGAGCATGCAACTTCATGCTCCATACATACAAACCAAACCCCATGAAGGATGAATCAGAAGGTTGGAACAATGCCTGA 1971 0.449 MGNADYAYPSGMNVECVHRVAIPPPQPFFKSLKYSLKETFFPDDPFRKFKNQPASKRFVLGLQYFFPIFEWGPKYTLHFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNFNENPKLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFSQTHEWRWESALLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLASVILGSLLVYFTHAEKHGVQVIGNLKKGLNPPSVTDLVFVSPYMGTAIKTGLITGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSSIIVSAMLGVIDYQAAIHLWKIDKFDFLVCFSAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSAVYRNVEQYPNANHIPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKSTGQTSLQYVIMDMTAVANIDTSGISMLEECKKTVDRRGLQLALVNPGSEVMKKLNKSKFLDELGHKWVYLTVEEAVGACNFMLHTYKPNPMKDESEGWNNA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02786 656 Pfam STAS domain 512 630 IPR002645 -
Pumo5g02786 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Pumo5g02786 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Pumo5g02786 656 NCBIfam sulfate permease 67 630 IPR001902 GO:0016020|GO:0055085
Pumo5g02786 656 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
Pumo5g02786 656 Gene3D STAS domain 491 636 IPR036513 -
Pumo5g02786 656 FunFam Sulfate transporter 31 491 637 - -
Pumo5g02786 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016020
Pumo5g02786 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Pumo5g02786 656 PANTHER SULFATE TRANSPORTER 29 637 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02786 Pumo-Chr5 74783294 74791034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02786 18 644 Inorganic Solute Cotransporters AT4G02700 68.631 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02786 K17471 - gmx:100791091 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02786 5 74783294 74791034 Pumo5g02786 5 74783294 74791034 ECH