Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02775 ATGCCAAACACGCCGCTAACTAGGAAAAAAAACAACCTCAGCAGCCGCTTGATCCTGAACCTATGTTTCTCAAAACCCATGCAGCCGTTCACACCCAAATCTCCCCCGACAAGCCCCACCGCCACTTCCTCAACCGTTGATCACAATCACAACCGTTCATCAACCCTGATCAAGAACTTCAACGATGATCGCAGTACAGTGACCCCACAAAACCCATTTCCGAGCCTCGGACCCGAATCCGAACCCGAACCCGCCGACTTGGCCACTGCCTTCGCCTCCCAACGCTTCTTCTTCACCTCCCCCGGCCGCTCCAACTCCATCGTCGAATCCACCAACACCACCGACGCCGACTGCACCACCACATCCTCATCCTCGCCGTCACCGGTGCCGGCAGATGAAAGGCAGAACCAGCTCAAGAGTCTTGCTGACTGTTCAACCAGTTCTGACGAGAGGGAAGCAAAGGCGTTATTGGACAGCAGCGTTGCGGTAACGAAGTACTCGCCGGACCCTTACGCAGACTTCCGGCGGTCCATGGAGGAGATGGTGGCGGCGCGTCCCGAGTTGATGGATGTGGCATCCAAATGGCGCGAGCTGCACGAGCTTCTTCTCTGCTATCTCGCGCTCAACCCGAAGCACACACACAAATTCATTCTCCGTGCCTTTTCTGATCTTCTCCTCAGCCTCATATCGCGCTCTTATTCGCCGCCGCAGGATCCCGGTCCCTGCGATGTCGCAGGCGGTGACGGTGGATGTTCGGGTTAG 762 0.5682 MPNTPLTRKKNNLSSRLILNLCFSKPMQPFTPKSPPTSPTATSSTVDHNHNRSSTLIKNFNDDRSTVTPQNPFPSLGPESEPEPADLATAFASQRFFFTSPGRSNSIVESTNTTDADCTTTSSSSPSPVPADERQNQLKSLADCSTSSDEREAKALLDSSVAVTKYSPDPYADFRRSMEEMVAARPELMDVASKWRELHELLLCYLALNPKHTHKFILRAFSDLLLSLISRSYSPPQDPGPCDVAGGDGGCSG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02775 253 MobiDBLite consensus disorder prediction 37 74 - -
Pumo5g02775 253 Pfam Transcriptional repressor, ovate 167 228 IPR006458 -
Pumo5g02775 253 MobiDBLite consensus disorder prediction 234 253 - -
Pumo5g02775 253 MobiDBLite consensus disorder prediction 26 84 - -
Pumo5g02775 253 ProSiteProfiles OVATE domain profile. 163 227 IPR006458 -
Pumo5g02775 253 NCBIfam uncharacterized plant-specific domain TIGR01568 161 229 IPR006458 -
Pumo5g02775 253 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 53 228 IPR038933 GO:0045892
Pumo5g02775 253 MobiDBLite consensus disorder prediction 102 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02775 Pumo-Chr5 74646731 74647733 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo5g02775 Ovate 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02775 - - gmx:102663086 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02775 5 74646731 74647733 Pumo5g02775 5 74646731 74647733 ECH
Pumo5g02775 5 74646731 74647733 Pumo3g02354 3 35814718 35815651 PCT