Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02723 ATGGCTGAAGGCTCTGAGATGATTTGGGGTGGAGTCGGTTGCTGTTTGGGTGCAGCTGCTCTATACCTTAACGGGAAAATATGTGAATGGGAAATGAAAAATCTTAAATCTGTTACCCGGGTCAAACAGCTAAAAGAATTAGCCCAACTTTCGCCCTCGGTCGTCGCCATTTCTGGAAGAGTTGGCTCCGAAAGCCCAATTGACTGTGAGCTAAGTGCTTTAAAGGGTGCAATAGTTGAAGAAAGGGCCGAACAACATTTTCTTAAAAAGCAAAAGGTTACTACTTATGAAACAATAAAGGAAAAGGATACTACTCATGAAAAAGAACAGGAAAAGGATACTACTCATGAAAAGAAACAGGAAAAGGATACTATTCGTGAGATAAAACAGAAAAAGGAAGATGCAACTGGTCGTGTGCGTGTGGTTGGAGCTCGGAATGCCAAGCATTTTGAATTACCTGTTCAAAGGGAGGAATTTAAAGAGACAGTTCAATCACTGGATCATATAATGTATGATTATCTGCAGGGTATTAAGGTACTTGGTGTCAAGAAAACTGAGCGGGTACTTCCAATCGGCACCTTCTTGACTGTTGTTGGAAAGGCTTCTAAAGATGACACTGGGAGCATTAGAATTCAGCAACCCAACAATGGTCCATTTTATGTCTCACAAAAAACAATCGATCAGCTCATTGAAGATCTTGGGGAATCTGAAAGGTTTTCAAAGTATGCAGCAGTGGGTTTGGCAATATTTGGTGCTCTTTTAATACGTGCTGAATGCCTTGACCGTGGTAGAGCCTCGAAGAGCTAG 807 0.4164 MAEGSEMIWGGVGCCLGAAALYLNGKICEWEMKNLKSVTRVKQLKELAQLSPSVVAISGRVGSESPIDCELSALKGAIVEERAEQHFLKKQKVTTYETIKEKDTTHEKEQEKDTTHEKKQEKDTIREIKQKKEDATGRVRVVGARNAKHFELPVQREEFKETVQSLDHIMYDYLQGIKVLGVKKTERVLPIGTFLTVVGKASKDDTGSIRIQQPNNGPFYVSQKTIDQLIEDLGESERFSKYAAVGLAIFGALLIRAECLDRGRASKS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02723 268 PANTHER - 7 258 IPR044231 GO:0004842|GO:0016567
Pumo5g02723 268 Coils Coil 118 138 - -
Pumo5g02723 268 Pfam E3 Ubiquitin ligase 105 253 IPR022170 GO:0004842|GO:0006996|GO:0016567
Pumo5g02723 268 MobiDBLite consensus disorder prediction 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02723 Pumo-Chr5 73880212 73882673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02723 9 261 C3H Transcription Factor Family AT1G63900 47.308 7.27e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02723 K15688 - gmx:100803252 231.876