Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02712 ATGCCACTCTTTGGGTTCCTTGTGACCATCTTCTTCCTGACTCTCCCTACCCTTTCCCTTTCCGTCCCATGTCCCCTCAACATCACGCTCCTCCGTTCAATACCCTCCTTGGACTCCGCCACGCGCTGCCATTACATCCTCCAAGCCATTCGGATTCTCCAATCCGATTACCTCCACCGAACCGGTTTCTTCTTCCCTAATTCCAATTCCTCCTTCTCTTGCTGGAACACTCTCCAATCTTCCATCAACCAATACGACATTCGCTCCTCTTGCAACCTCTCTTCCTCTTGCATTTCCCTCTCCTGCATCAACATCACCACAAGATCCCAGTTCGAAAATTCTCTTCCTATCTCTGCTCGCAAACCTGTGTGGAACAGTTGTAACCAATCTCTTAAAAATCCCGTGCCTTGTGCTCGCTGCAAGAAGGCTTTGTCCACCTTGGACTCCTCCCTCGCGGAATTACCACCATCCACTGGGGAACTCGTTGACTGCAAGGCTATTGCTTCCATCTATGCCGCTTCCTTCTCCGATCTGCAAGACTCCGGAACCGCTAACTGTTTGTTCAACTTCAACCTCGATTTTTCCTCTTCGGATTCCAGTGGTAAGCGTCGAAACATTCTTCTTGTGGTTTTTTCTCTCTTGGCCTTCTTCTTGCTCGTCTTTGGTGCCTCTTGGGGTTACTTTAGATTGAAGCAGAAAAAGGATGTTGGTAAAATTGAGATGGGTTTGGGTTTGGATTCTATGAACCCGAGTACTACTTTGATTAGGTTCACTTTTCATGAGATTAAGAAGGCTACTAGGAATTTCGCCGGTGACAACATCATTGGGAAGGGGGGTTATGGGAATGTTTATAAAGGGGTGCTGTCTGATGGGACCCAAGTTGCATTGAAAAGGTTCAAGAATTGTTCTGTTGCTGGGGATGCTAGCTTCACTCATGAGGTGGAGGTTATTGCAAGTGTTAGGCATGTGAACCTTGTTGCCTTGAGAGGTTATTGTACTGCTACGACCAATCTAGAGGGTCACCAGAGGATTATTGTCATTGATTTGATGGAAAATGGGAGTCTTTATGATCATTTATTTGGTTCTGCTAAGAAGAAACTCAGTTGGCCAATTCGTCGAAAGATTGCTCTAGGGACCGCTAGGGGCTTGGCTTATTTGCACTATGGGGCTCAGCCTTCCATCATTCATAGGGATATTAAGGCTAGTAACATACTGCTAGATCACAAGTTTGAAGCCAAGGTTGCGGATTTCGGGTTGGCGAAGTTCAACCCTGAGGGAATGACTCATATGAGTACTAGAGTGGCTGGAACAAAGGGGTATGTTGCTCCTGAGTATGCCTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTTTGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAAAAAGGCTCTTCATGTGGACAATGATGGCCAACCCTCTGCACTCACTGACTTTGCTTGGTCATTGGTTAGGAATGGTAACGCTTTGGATGTTATTGAAGATGGCATGCCAGAACTTGGTCCAAAAGAAGTTCTTGAGAAGTATGTGTTGGTTGCTGTACTATGTTGTCATCCACAATTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGCTTGAGACAGAAGAATTGGAACAACCGATCTCGTCTATTGCTGAGAGGATTAATGTTGAGAAATCTGTCAGTAGTAACTAG 1707 0.4564 MPLFGFLVTIFFLTLPTLSLSVPCPLNITLLRSIPSLDSATRCHYILQAIRILQSDYLHRTGFFFPNSNSSFSCWNTLQSSINQYDIRSSCNLSSSCISLSCINITTRSQFENSLPISARKPVWNSCNQSLKNPVPCARCKKALSTLDSSLAELPPSTGELVDCKAIASIYAASFSDLQDSGTANCLFNFNLDFSSSDSSGKRRNILLVVFSLLAFFLLVFGASWGYFRLKQKKDVGKIEMGLGLDSMNPSTTLIRFTFHEIKKATRNFAGDNIIGKGGYGNVYKGVLSDGTQVALKRFKNCSVAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVIDLMENGSLYDHLFGSAKKKLSWPIRRKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFNPEGMTHMSTRVAGTKGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALHVDNDGQPSALTDFAWSLVRNGNALDVIEDGMPELGPKEVLEKYVLVAVLCCHPQLYARPTMDQVVKMLETEELEQPISSIAERINVEKSVSSN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02712 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 394 406 IPR008271 GO:0004672|GO:0006468
Pumo5g02712 568 Gene3D Transferase(Phosphotransferase) domain 1 350 563 - -
Pumo5g02712 568 Pfam SPARK 22 153 IPR043891 -
Pumo5g02712 568 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 230 348 - -
Pumo5g02712 568 CDD STKc_IRAK 275 544 - -
Pumo5g02712 568 Pfam Protein kinase domain 273 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02712 568 SUPERFAMILY Protein kinase-like (PK-like) 248 544 IPR011009 -
Pumo5g02712 568 Gene3D Phosphorylase Kinase; domain 1 240 348 - -
Pumo5g02712 568 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 350 551 - -
Pumo5g02712 568 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 548 - -
Pumo5g02712 568 ProSiteProfiles Protein kinase domain profile. 269 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02712 568 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Pumo5g02712 568 SMART serkin_6 269 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02712 Pumo-Chr5 73727868 73729996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02712 8 563 Receptor kinase-like Gene Family AT2G48010 58.377 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pumo5g02712 Pkinase 4.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02712 - - gmx:100819980 908.286