Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02711 ATGTCGATCCCTTTCTATTTCTATATATTTTCTATTATTTTTCTTACCTTAAATTTCCCAAGCTTTTCGGTGGGCGCAAACGACACCACCGTCTCATGTCCCCTCAACATAACCGTCCTTCGCGTGGTGAGCGGCGGCGCCCGCCCCTCCTTGGACTCCGGCACCGCGTGCCATTACATCCTGCAGGCCCTCCACCTCCTCCAAGCGGATTACCTCCGCCGCGAGAACCGCTTCGTTCCGCCGCTGAACTCGTCGGAGTCGTGCTGGAACACCTTCCAATCCTTCATCAACGAATTCGACCCCAGCATCAACATCCGCTCCGCCTGCGGCTTCAAAACGGAGTGGATCTCTCAAGGCTGCATGAACATCACCACCAGAAAACAGTACGAAGACATCGTCGCCCCCTCCGCAACCCAAGACGTCAAAACGAACTGCAACCAATCCCTCGAAAACAACTCCCCCTGCGCCCTCTGCACAACCAAACTCTCCAGCATGTTATCCTACTTGACCGGAACAACCACAGGGAACGTCACCGATTGCAGAGCTTATACTTTCATCTACGCCGCTTCTGTCTCTGACCAATACGGACCCACTGACCCCGGAACCGCTAAGTGCCTCTTCGGCCTCGACTTTTCCTCCTCCGGCTCCAGTGGTAAGCGCCGAACAATTGTTATTGTAGTTGTTTCCGTTTTCTGTGCGTTGGGTTTGGTTGTGTTTGGTGGGCTTTGGGCTTACTTGAGGTTCAAAAAGAGAAAGGAGGCTGCAAGGGGGAATGGTGCTGGAACAACTGAGCTAGGTTTGGGCTCTGGGTTGGATTCCATGAACCAGAGTACCACTTTGATTAGGTTCACTTTTGAAGACGTTAAAAAAGCTACTAGGAACTTCTCCAGGGATAACATAATCGGAAGTGGGGGTTATGGGAATGTTTATAAAGGCGTGCTCTTGGATGGTAGCCAAGTTGCGTTCAAAAGGTTTAAGAATTGTTCTGTTGCCGGGGATGCTAGCTTCACTCACGAGGTTGAGGTTATTGCGAGTGTTCGGCATGTGAATCTTGTTACCCTCAGAGGTTATTGTACTGCTACGACCAATCTAGAGGGTCACCAGAGGATTATTGTCACTGATTTGATGGAAAATGGGAGTCTTTATGATCATTTATTTGGTTCTGCTAAGAAGAATCTCAGCTGGCCAATTCGTCAAAAGGTTGCTCTAGGGACCGCTAGGGGGTTGGCTTATTTGCACTATGGAGCTCAACCTTCCATCATTCATAGGGATATTAAGGCTAGTAACATACTTCTGGACCACAAGTTTGAAGCCAAGGTTGCAGATTTTGGACTAGCCAAGTTCAACCCTGAGGGAATGACTCATATGAGTACTAGAGTGGCTGGGACTATGGGGTATGTTGCTCCTGAGTATGCTTTGTATGGACAATTGACAGAGAGAAGTGATGTGTTCAGTTTTGGTGTTGTGCTTCTTGAGCTCTTGAGTGGGAAAAAGGCGCTTCAATCGGACGATGATGGCCAACCCACTGCACTCACTGACTTTGCTTGGGCGTTGGTCAGGAATGGTAGTGCTTTGGATGTTGTTGAAGATGGCATTCCAGAAGCTGGTCCACCAGAAGTTCTTGAGAAGTATGTATTGGTTGCTGTATTGTGTTCTCATCCACAGCTATATGCTAGGCCTACAATGGATCAGGTTGTTAAAATGCTTGAGACTGATGAATCAGTGCCCTCTTTAATGGAAAGGCCAATTCCTTTTATTTCTGGAAGGCTTGATATTGAGAAATCTGCACTGAGTAACTCCGGTCAGCTCTGCAGTCCAACTGGTTATCAAGCATATACATTACAAGCTCGGCGCAAATCTAATTCTAAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGCAAGTTCGGTGGCTGAGACTGTGACCACAGATTGA 1932 0.4808 MSIPFYFYIFSIIFLTLNFPSFSVGANDTTVSCPLNITVLRVVSGGARPSLDSGTACHYILQALHLLQADYLRRENRFVPPLNSSESCWNTFQSFINEFDPSINIRSACGFKTEWISQGCMNITTRKQYEDIVAPSATQDVKTNCNQSLENNSPCALCTTKLSSMLSYLTGTTTGNVTDCRAYTFIYAASVSDQYGPTDPGTAKCLFGLDFSSSGSSGKRRTIVIVVVSVFCALGLVVFGGLWAYLRFKKRKEAARGNGAGTTELGLGSGLDSMNQSTTLIRFTFEDVKKATRNFSRDNIIGSGGYGNVYKGVLLDGSQVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSAKKNLSWPIRQKVALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALQSDDDGQPTALTDFAWALVRNGSALDVVEDGIPEAGPPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFISGRLDIEKSALSNSGQLCSPTGYQAYTLQARRKSNSKEEEEEEEEEASSVAETVTTD 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02711 643 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 639 - -
Pumo5g02711 643 Coils Coil 609 629 - -
Pumo5g02711 643 ProSiteProfiles Protein kinase domain profile. 295 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02711 643 MobiDBLite consensus disorder prediction 615 643 - -
Pumo5g02711 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Pumo5g02711 643 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 376 577 - -
Pumo5g02711 643 Gene3D Transferase(Phosphotransferase) domain 1 376 579 - -
Pumo5g02711 643 SUPERFAMILY Protein kinase-like (PK-like) 272 570 IPR011009 -
Pumo5g02711 643 CDD STKc_IRAK 301 570 - -
Pumo5g02711 643 Pfam SPARK 29 180 IPR043891 -
Pumo5g02711 643 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 258 374 - -
Pumo5g02711 643 SMART serkin_6 295 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02711 643 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pumo5g02711 643 Pfam Protein kinase domain 296 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02711 643 Gene3D Phosphorylase Kinase; domain 1 269 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02711 Pumo-Chr5 73708755 73711500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02711 7 614 Receptor kinase-like Gene Family AT2G48010 60.294 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pumo5g02711 Pkinase 3.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02711 - - gmx:100819453 1080.86