Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02690 ATGGAGAGAGAGACCCACGACTTCATGAACGTCGATTCTTTCTCTCAGCTCCCCTTCCTCCGCCCCGCACCACTACCCTCCAAAGAAAAACCCCTTCGCCTCTTCGGCCAAGAATTCTGCGACAACAACAACAACAACGTTAACGCTTCCGAACATCATAATAATACCAACAAGCATGACGCTAACGACAACAACATAGAAAACAACGGCGAGAGCAGCAGCCGCAGATTCGAGTGCCATTATTGCTGCAGAAACTTCCCCACTTCTCAGGCCTTAGGCGGCCACCAAAACGCGCACAAACGAGAGCGCCAGCACGCGAAACGACACCTTCAAAGCACCCTCTCCGATGCCACCTCGTACGGGTTCATGAACTACAGGTTCGGTTCAACAACGCCAATGTATAATAATTACTCCTACTCTTCTTATCCAACGTGGAACAATTCCAACTCGTTTGGGAACACTGGAACTGGAAGGTTCTACGGAAGCTCCAGCTCCAGCTCCTATTCTCATCATCAACTTCAACTTCAACCCATCAATGGAAGCCCTTTGGGCTTGTATGCGCAAAGTAACCCTATTTTCAACCGTAGTGAACGCTCGTTGCATCCGTTGCCTTTGTTTTCTGGTGAGGAAATAGTGAACGCGAGGATGGGGCACTCTGGTTCGCAAAATCGGTTTGGTAATTATGACCCCAAACCCAGCGTAAACGACCATCTAGCTGAGAAAATTGTCCACTCGTGTGGGGATCATGTGAAGCGTATAAAACAGTTGAGCGCACATGAACATTTTGTCCGAACACACGTGTGCGTAATTCTAGCACATTGCCCGGACAGGTATAGTGCCGACAGAGCACAAAATTTATATGACAATAGACACTACCCAACGTACTGCCTTACCTACGAAATTTATTACAAGAACAAGGATATGATCAACCACAAGGATTTGATATCTTCAATCGAGTGTGCTATATATACATACAGTTTTGAAAGCTCCATCCTCTTCTAA 1002 0.4681 MERETHDFMNVDSFSQLPFLRPAPLPSKEKPLRLFGQEFCDNNNNNVNASEHHNNTNKHDANDNNIENNGESSSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLQSTLSDATSYGFMNYRFGSTTPMYNNYSYSSYPTWNNSNSFGNTGTGRFYGSSSSSSYSHHQLQLQPINGSPLGLYAQSNPIFNRSERSLHPLPLFSGEEIVNARMGHSGSQNRFGNYDPKPSVNDHLAEKIVHSCGDHVKRIKQLSAHEHFVRTHVCVILAHCPDRYSADRAQNLYDNRHYPTYCLTYEIYYKNKDMINHKDLISSIECAIYTYSFESSILF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02690 333 SUPERFAMILY beta-beta-alpha zinc fingers 74 105 IPR036236 -
Pumo5g02690 333 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Pumo5g02690 333 Pfam C2H2-type zinc finger 76 101 - -
Pumo5g02690 333 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Pumo5g02690 333 PANTHER ZINC FINGER PROTEIN GIS 2 237 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pumo5g02690 333 MobiDBLite consensus disorder prediction 45 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02690 Pumo-Chr5 73272697 73276604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02690 2 239 C2H2 Transcription Factor Family AT3G58070 39.163 2.46e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02690 - - gmx:100814129 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02690 5 73272697 73276604 Pumo5g02690 5 73272697 73276604 ECH