Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02675 ATGTCACCTAGATTCTATGCATTTGCTAAAACCAGCATTCGGGAAAGAATATACAAGAAGCCAACTATGTTATCTTTTAATCATTCCCTACTCACCACCATTTTCTTAGTGCTAACAATCTTTAATATTCATCCATCAAATGCTCAACTGAGTTCAACCTTCTACTCCAGCACATGCCCCAACGTGTCTTCCATTGTGCGCAGCGTTATTCAGCAGGCTCTGCAATCTGATCCTCGTATTGCTGCGAGCCTAACTCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGTGATGGATCCCTTTTGTTAGACGTAGGTGGCAACATAACACTGAGCGAGAAAAATTCAGGTCCCAACAATAATTCCGCACGAGGCTTTGATGTAGTAGACAACATAAAGACATCTGTTGAAAATTCATGCCCCGGTGTTGTATCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAGCTTCTGTGTCTTTGGGAGGAGGTCCTTCATGGAACGTACTACTAGGCAGAAGGGACGGTTTGATTGCAAACCAATCTGGTGCGAACACATCCATTCCCAATCCAACTGAAAGCCTGGCCAATGTCACAGCCAAATTTGCTGCCGTTGGCCTAAACATAACTGATCTCGTTGCATTATCTGGTGCACATACTTTTGGGCGTGCGCAATGTAGATTTTTCAACCAGAGACTGTTCAACTTCAGCGGCACGGGTAGCCCTGATCCCACGCTGAACGCAACCTATTTGGCGACCCTGCAGCAAAATTGTCCACAAAATGGAAGCGGGACCACTTTGAACAACCTTGACCCTTCATCCCCAGACACCTTTGACAACAACTATTTCCAAAACCTTCTCAGCAATCAGGGCCTTCTCCAAACAGACCAAGAGCTCTTTTCCACTAATGGCTCTGCCACAATCTCCATTGTCAACAACTTCGCCACCAACCAAACCGCATTCTTCCAAGCCTTTGCTCAGTCCATGATCAATATGGGTAATATTAGCCCTTTAACTGGAACCCAAGGAGAAATCAGATCCGATTGTAAGAGGGTCAATGGAAGTTAA 1065 0.4479 MSPRFYAFAKTSIRERIYKKPTMLSFNHSLLTTIFLVLTIFNIHPSNAQLSSTFYSSTCPNVSSIVRSVIQQALQSDPRIAASLTRLHFHDCFVNGCDGSLLLDVGGNITLSEKNSGPNNNSARGFDVVDNIKTSVENSCPGVVSCADILALAAEASVSLGGGPSWNVLLGRRDGLIANQSGANTSIPNPTESLANVTAKFAAVGLNITDLVALSGAHTFGRAQCRFFNQRLFNFSGTGSPDPTLNATYLATLQQNCPQNGSGTTLNNLDPSSPDTFDNNYFQNLLSNQGLLQTDQELFSTNGSATISIVNNFATNQTAFFQAFAQSMINMGNISPLTGTQGEIRSDCKRVNGS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02675 354 ProSiteProfiles Plant heme peroxidase family profile. 49 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 Gene3D - 54 352 - -
Pumo5g02675 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Pumo5g02675 354 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Plant peroxidase signature 326 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 Gene3D Peroxidase, domain 2 188 331 - -
Pumo5g02675 354 FunFam Peroxidase 53 204 - -
Pumo5g02675 354 FunFam Peroxidase 188 331 - -
Pumo5g02675 354 Pfam Peroxidase 66 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PANTHER PEROXIDASE 72-RELATED 47 351 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02675 354 CDD secretory_peroxidase 49 351 IPR033905 GO:0004601|GO:0042744
Pumo5g02675 354 SUPERFAMILY Heme-dependent peroxidases 49 352 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02675 Pumo-Chr5 72904619 72907731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02675 30 354 Peroxidase AT5G06720 74.154 8.68e-175 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02675 K00430 - gmx:100810355 615.535