Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02664 ATGTTTTCGTGGCTTGCAAGTATAGTTTCGTCGTGCTTGAGGCCCATGAGGCGCTATGCCCGCATGAGCAAAGATGAAGATGGTGATGATGTTGATGAGTCTATTTCATCTGTTGAAGACTCTCTTCTGTGGCGTAGAGACCTTGAGAAGCATTCATGTGGTGAATTCTCCTTCGCTGTGGTTCAGGCCAATGAAGTTATTGAGGATCATAGCCAGGTTGAGATTGGCTCTGATGCCATCTTTGTTGGGGTTTATGATGGCCATGGTGGTCCTGAAGCTTCTCGGTTCATCAGAGATCACCTCTTCCAGCACCTAATGAGGATTGCTCGGGATAATGGAACTATCTCTGAAGAAATTCTCACGGGTGCTGTTTCTGCTACAGAGGATGGGTTTATGACTCTTGTTCATAGGAGTTATATGATAAAGCCATTGATTGCATCAATTGGTTCCTGTTGTCTGGTTGGTGTTATCTGGAAAGGGACTCTATATATCGCCAATCTTGGAGACTCCCGTGCCGTAATTGGTTCTATAGGTAGATCTAACAAGATCTTTGCTGAGCAGTTGACTAGAGAGCACAATGCTAGTATGGAGGACATTAGACAAGAACTTAGGGCTTTGCATCCACAAGATTCACAAATTGTAGTTATGAATCGTGGAACATGGCGTGTTAAAGGCATCATCCAGGTATCCAGATCCATAGGAGATGCATATTTGAAGCGGCCACAGTTCTCTCTCGATCCATCATTCCCACGGTTCCACTTGCCTGAACCTATAACCCAACCTGTTCTAACAGCAGAACCATCTCTATGTTCAAGAGTTTTGCAACCCCATGACAAATTCCTTATATTTGCGTCCGATGGACTTTGGGAACACATGACAAATCAGCAAGCAGCTGAGATTGTTCATAAGAATCCTCGAAATGGGGTTGCAAGAAAACTTGTTAAGGCTGCTCTAAAGGAGGCAGCTAATAAAAGGAAAATGAAATATAAAGAGCTTCAGAAGATTGAGAAAGGGAACAGAAGGATTTTTCATGATGATATCACTGTGATTGTTGTCTTCATAGACCATGAGTTGCTTGGGAAGAAAGTTACTGTGCCAGAGTTGTCCATCAGAGGGTTCATTGACTCGGCTGGACCATCAAATTTTACATGTGTCCAGGAGTTTATGTGA 1170 0.4342 MFSWLASIVSSCLRPMRRYARMSKDEDGDDVDESISSVEDSLLWRRDLEKHSCGEFSFAVVQANEVIEDHSQVEIGSDAIFVGVYDGHGGPEASRFIRDHLFQHLMRIARDNGTISEEILTGAVSATEDGFMTLVHRSYMIKPLIASIGSCCLVGVIWKGTLYIANLGDSRAVIGSIGRSNKIFAEQLTREHNASMEDIRQELRALHPQDSQIVVMNRGTWRVKGIIQVSRSIGDAYLKRPQFSLDPSFPRFHLPEPITQPVLTAEPSLCSRVLQPHDKFLIFASDGLWEHMTNQQAAEIVHKNPRNGVARKLVKAALKEAANKRKMKYKELQKIEKGNRRIFHDDITVIVVFIDHELLGKKVTVPELSIRGFIDSAGPSNFTCVQEFM 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02664 389 FunFam Probable protein phosphatase 2C 42 46 362 - -
Pumo5g02664 389 CDD PP2Cc 56 354 IPR001932 -
Pumo5g02664 389 ProSiteProfiles PPM-type phosphatase domain profile. 55 354 IPR001932 -
Pumo5g02664 389 PANTHER PROTEIN PHOSPHATASE 37 352 IPR015655 GO:0004722|GO:0006470
Pumo5g02664 389 SMART PP2C_4 49 352 IPR001932 -
Pumo5g02664 389 Gene3D - 24 363 IPR036457 -
Pumo5g02664 389 SUPERFAMILY PP2C-like 61 355 IPR036457 -
Pumo5g02664 389 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Pumo5g02664 389 Pfam Protein phosphatase 2C 76 322 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02664 Pumo-Chr5 72800730 72804352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02664 1 383 PP2C-type Phosphatase Gene Family AT5G06750 67.866 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02664 K01102 - gmx:100806476 708.753