Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02662 ATGTTGTCGTGCGTCCTTGCTGAGTCGAAAGAAACAAACAATTGGAGCGAGGGAAGTGTTCCCGCCATGGGAATGGAGCGAGTGCAGTGTGCCTATGCCTCTCTGGACGAAGCGTTCGAAATTGGGAAAGAGATGTATCAGGGTCAGCAATACAGCCAGATTTACTTCGCGCGCCTTCATTTGATGAGAACTCTCTTGTACTCCCTCGTTCCCCATTGGAAACCCAATTTTCCAGTGTGCACGGTGCTGGGATTGGAAGAGGGCAAGGAGTGTGTCATTGTTGGGACCCTCTATAAACACATGAAGCTCAAACCTTGCATTCTTGATGAGTATTCTAAGCAGAGATCAGTGGTTCCACTCGTCAAGCCACATAACTTCATGCACCCGGACGATCACCTAGTTTTGGAAGATGAAAGTGGGCGGGTTAAGCTTGGTGGGAATATCATTTTGCCATCTGAATATGTAACAGGAATTGTGGTTGCTTTACTTGGAAAGGAAACGGGGGCAGGTGACTTTTTGGTTCAGGATGTCCTAGATGCTGGCTTACCACCACAGATAGAATTTCCCCTTAAATCAAGGGAAGACAAATATGTTGTTCTTGTGTCAGGGTTAAGTGTTGGGAGCAGCAGCTCTAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATTACAGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCACAAATTGTTCGAGTTGTCTTTGCTGGAAATTTAGTTGAGATACCTCGCAGACTTCTTAATGGACAGAATTTGGCTTCAAAGGATCTCTCAAGGATGGCTGAGCCAATAAAGGAGCTAGATATTCTGTTGAGTCAGATAGCTGCTGGTTTGCCTTTGGATATCATGCCGGGACCCAGTGACCCTGCTAATTTCTCATTACCACAGCAGTCATTGCATAGATGCCTTTTCCCTGGGTCGTCGGCATATAATACTTTTAGATCTTGTACAAATCCTCATTGTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACATCAGGTCAAAATGTAGATGATCTTGAGAAGTATTCAGAGGCAAAAAATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTGGCACCCACTGCACCTAATACTCTTGGATGCTATCCTTATACTGATAGGGATCCTTTCTTCATTGAGAGCTGTCCTCATGTTTACTTCATTGGAAATCAAGATAAATTTGAAACTCGTGTCATAAAGGGATCAGAAGGGCAGTTGGTGAGGCTCATATGTGTTCCTAAATTCAGTGAAACTGGAGTTGCTGTTATGCTAAATCTGAGGGACCTTGATTGTCATGCTCTCAGTTTTGGAACTCAATTCAGCTCATAA 1368 0.4357 MLSCVLAESKETNNWSEGSVPAMGMERVQCAYASLDEAFEIGKEMYQGQQYSQIYFARLHLMRTLLYSLVPHWKPNFPVCTVLGLEEGKECVIVGTLYKHMKLKPCILDEYSKQRSVVPLVKPHNFMHPDDHLVLEDESGRVKLGGNIILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPPQIEFPLKSREDKYVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIVRVVFAGNLVEIPRRLLNGQNLASKDLSRMAEPIKELDILLSQIAAGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSAYNTFRSCTNPHCFELDNVRFLGTSGQNVDDLEKYSEAKNKLEFMERTLRWRHLAPTAPNTLGCYPYTDRDPFFIESCPHVYFIGNQDKFETRVIKGSEGQLVRLICVPKFSETGVAVMLNLRDLDCHALSFGTQFSS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02662 455 CDD MPP_PolD2_C 212 449 IPR041863 -
Pumo5g02662 455 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 25 449 IPR024826 -
Pumo5g02662 455 Pfam DNA polymerase alpha/epsilon subunit B 198 408 IPR007185 GO:0003677|GO:0006260
Pumo5g02662 455 FunFam DNA polymerase delta subunit 2 56 180 - -
Pumo5g02662 455 Gene3D - 189 454 - -
Pumo5g02662 455 FunFam DNA polymerase delta small subunit 183 455 - -
Pumo5g02662 455 Gene3D - 57 180 - -
Pumo5g02662 455 Pfam DNA polymerase delta subunit OB-fold domain 50 177 IPR040663 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02662 26 454 Core DNA Replication Machinery Family AT2G42120 76.923 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02662 K02328 - gmx:100780072 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02662 5 72789495 72794524 Pumo5g02662 5 72789495 72794524 ECH