Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02656 ATGATCGTGGCAAAACGCGAATTGATCAACGACGATGACGGCAGCAGCAGCATCGACAAACGTCAATCTGCACTCAACGCCGTTAACGACGACGCTGATTACCAAACTCCGAAAGGCCGTCGAGGTATTCGTTCTCGGTACCTCGCCGTTACGAGCATGATTCACGATGAAGGGGAAGAAATTGCGAGGCCTGACTCTGACAAGTTTGATTTGATCTTTAATGAAATGGAGAGCTTACATCAGATAGTTACAAAGCCAAGAGAACAAGTAGCTGATGCAAAGGCTCTTTGGGACATCACCCAATCTTTGGTAATGTCTGTGAAATCTGTTGCCAACGGTGGACTAACTCCTTCAGACTTTGTTACCCACATTCTTAAAAAATTCGGAGGACAAGTTGGACCAAGTAATAGCACAGAAGATTGCAGCAGAAACTCAGTAGTTTGGAAGGATATTGGACTTGCAGTGTCATGTGTTTTTAGAGCGGGTTGTGGGTGTCATACAATGATTGGCCCAATGGATGCTAAAATGAAGCAGAGGAAGGTCATTAATCGTCGAAAGCGTGTGAGACTCACTGAAGTGGCACGGCCTGAAGAGCTTGGTGGAGGTTCCGGGGAAGAGAGAACTGAGACTGATAAACATATGTTAACTATGTTTAACATCTTAAGGATTAATAAGGTTGTCAAGCTTGAAAATCTGGTTTTGAATCGGAACTCATTTGCACAAACGGTGGAGAATTTATTTGCTTTATCGTTTTTAGTCCGAGATGGGCGGGCTGAAATAAAAGTGAATGAGGCTGGATGGCAACTAGTTTCGCCAAGGAATGCTCCTGCTGCAACTTCAGTTCTTTCCGGGGATGTTGCTTTCAGTCACTTTGTATTCCGATTTGACTTCAGTGATTGGAAGCTTATGGTTCGCTCTGTTGGGGTTGGTGAGGAGCTGATGCCTCATAGGGATAGCCAATCACAGAATCAGGGTGCAGTATCTGCAGAATCTCGTGAAAAAAAGCCTAGAACAACAAAAGTTTAG 1026 0.4444 MIVAKRELINDDDGSSSIDKRQSALNAVNDDADYQTPKGRRGIRSRYLAVTSMIHDEGEEIARPDSDKFDLIFNEMESLHQIVTKPREQVADAKALWDITQSLVMSVKSVANGGLTPSDFVTHILKKFGGQVGPSNSTEDCSRNSVVWKDIGLAVSCVFRAGCGCHTMIGPMDAKMKQRKVINRRKRVRLTEVARPEELGGGSGEERTETDKHMLTMFNILRINKVVKLENLVLNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAATSVLSGDVAFSHFVFRFDFSDWKLMVRSVGVGEELMPHRDSQSQNQGAVSAESREKKPRTTKV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02656 341 MobiDBLite consensus disorder prediction 314 341 - -
Pumo5g02656 341 Pfam Nse4 C-terminal 227 314 IPR014854 -
Pumo5g02656 341 PANTHER UNCHARACTERIZED 26 324 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02656 Pumo-Chr5 72733885 72737386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02656 40 319 Non-SMC Element family AT1G51130 52.669 2.46e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02656 K22825 - gmx:100781485 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02656 5 72733885 72737386 Pumo5g02656 5 72733885 72737386 ECH