Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02653 ATGAATAACCAAGAAGCAACTGAGCTCTTTGAAGGTCAAAATATTCTGTACATGCAGATATTTGCCCACCTAAAACCTCTGTGTCTTAAGTGGGCTGTGGAGCTAGGCATTCCAGACATAATACACAACCACGGGAAACCCATTACTCTTCCTGAGTTGGTCTCAACTCTTGAAATTCCACCATTTAAGGCTGGTTTCGTGCAGCGGTTGATGCGCTTTTTGGCTCACAATGGAATCTTTGATATCCATGAGAGTCCTCATGAAAATTTAACATATGCTCTAACCCCTGCATCAAAGCTTCTAGTCAGTGGAACTGGCCATTGTTTATCTCCAATGGTTTGGCTGAACACTGATCCACTTCTGATGAGTAAATATCATCACTTGGGGGAGTGGATTCGCGGGGAGGACCCCACACTGTATGAGACAGCCTTGGGGACAAGCGTTTGGGGACTCATTGAGCAAAAGCCTTCATATTTGAGTCTCTTTAGTGAGGGTATGGCAAGTGATTCCCAAATGGTGGACTTGGCACTCAAAAACTGCACTTCGGTTTTTGAGGGGCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACCACAACCAGAGTTATCTGCGAGGCATTTCCTAAGTTGAAACGTGTTGTGCTCGACCTTCCTCAGGTTGTTGCAAACTTGACAGAAAGCAATAATTTAAGTTTTCTTGGTGGTGACATGTTCAAATCTATCCCTCAAGCTGATGCAGTTCTACTAAAGTGGATTTTACATGATTTGAATGACGAAAATTGCCTAAAGATCCTGAAAAACTGTAAGGATTCTATTTCAAGCAAAGGCGATGGAGGGAAAGTGATTCTCATAGAAACAGTAATAAATGAGAAGCTAGATTACCAAGATATGACTGAAACAAAGCTCAGTTTGGATATAAGTATGTTGGCCATAAATGGAAAAGAGCGAACTGAAGAAGAATGGAAACAACTCTTCATTGAAGCAGGATTCAAACACTACAAAATATTTCCCATTTTTGGTTTTAGATCTCTTATTGAGGTCTATCCTTAG 1053 0.416 MNNQEATELFEGQNILYMQIFAHLKPLCLKWAVELGIPDIIHNHGKPITLPELVSTLEIPPFKAGFVQRLMRFLAHNGIFDIHESPHENLTYALTPASKLLVSGTGHCLSPMVWLNTDPLLMSKYHHLGEWIRGEDPTLYETALGTSVWGLIEQKPSYLSLFSEGMASDSQMVDLALKNCTSVFEGLDSIVDVGGGTGTTTRVICEAFPKLKRVVLDLPQVVANLTESNNLSFLGGDMFKSIPQADAVLLKWILHDLNDENCLKILKNCKDSISSKGDGGKVILIETVINEKLDYQDMTETKLSLDISMLAINGKERTEEEWKQLFIEAGFKHYKIFPIFGFRSLIEVYP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02653 350 PANTHER O-METHYLTRANSFERASE 24 335 IPR016461 GO:0008168
Pumo5g02653 350 FunFam Coniferyl alcohol 9-O-methyltransferase 1 101 - -
Pumo5g02653 350 FunFam O-methyltransferase ZRP4 103 350 - -
Pumo5g02653 350 PIRSF O-mtase 1 350 IPR016461 GO:0008168
Pumo5g02653 350 SUPERFAMILY "Winged helix" DNA-binding domain 7 104 IPR036390 -
Pumo5g02653 350 Gene3D Vaccinia Virus protein VP39 104 350 IPR029063 -
Pumo5g02653 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 350 IPR016461 GO:0008168
Pumo5g02653 350 Pfam Dimerisation domain 28 75 IPR012967 GO:0046983
Pumo5g02653 350 Pfam O-methyltransferase domain 125 332 IPR001077 GO:0008171
Pumo5g02653 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 349 IPR029063 -
Pumo5g02653 350 Gene3D - 1 101 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02653 Pumo-Chr5 72674849 72676019 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02653 22 336 Monolignol Biosynthesis Gene Families AT5G54160 33.951 2.83e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02653 K22588 K13262 gmx:100819796 551.592