Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02652 ATGCCCGCGACATGGCTGACCTCCATCCAGAACTTTGCAGGCTGGAAGGCCACTGTCATCGCTCATCCGACATTGGCTTCACCATTAGAGGTCCATTCCGACATTGGCTTCACCATTAGAGGGAAGGGGACAAGTGATTTCAATCCCACAATTTTATCCTCCATGTGGTTTGAACGACACCACGAATGGGATTGTAGCATACCAAAGAACCAAGTGTGTTGCTTCCATAGAGTTGTCTCTGACAAAGAAGACAATGCTTCCTCCGCCAAGATGGTGACGACACGTGCAGACAGAGTGTTGCTCATTTGTTTGGTCTTCACCATCTTGTTTGCATCCATACTATGGAGAAAACAAAACAAGACCCTCCTTCCACCGAGTCCCAAAGCCCTCCCAATTATAGGGCACCTCCACCTTCTCTCCTCAATACCTCACCAAGATTTTCACAAGCTCTCAATCCGCTACGGACCCATCATGCACCTTTTCCTTGGCTCAGTCCATTGCGTCGTGGCTTCCACCGCAGAAGCCGCCAAAGAGTTCCTCAAAACTCACGAAAACTCATTCTCCAACCGCCCCTCTAAAACGGCTGCCATTGAGACCTTTTCCTACGGTTGCCAAGACTTCTTGTTCGCACCTTACGGACCCGCTTGGAAGTTCATGAAGAAGCTCTGCATGTCCGAACTTCTCGGTGGCCGAATGCTGGACCAGTTCCTTCCCGTGAGGCGGCAAGAGACACTTAGATTCGTCAAACGCGTGCTCCGAAAGGGGATCGCCGGCGAGGCCGTGGATTTCGAAGGAGAGTTGATGACACTTTCCAATGACATTGTGTCGAGGATGACCGTGAGCCAGACATCTGAGAACGAGAACGAAGCTGAAGAGATGAGGAAGCTGGTGTCGGATGTTGCGGAACTCATGGGGACGTTCAATATGTCGGACTTCATTTGGTGCTTGAAGCCTTTTGATTTGCAGGGATTCAACAAGAGGCTCAAGAAAACTTGGAACAGGTTTGACGCCGTGTTGGACAGAATCATAAAGCAGCGTGAAGAGGAAAGAAGGAACAACAGAGAAGCGGGTGGAACACGACAGTTTAAGGATATGCTTGATGTTTTATTGGACATATTCGAAGATGAGAATTCTGAAATGAAATTAAACAAAGAGAACATTAAGTCCTTCATCATGGACATATTTGTTGCTGGGACTGACACGTCAGCTGTAACCATAGAATGGGCTATGGCAGAGCTAATTAACAATCCATGTGTGTTGGAGAAGGCAAGGCAAGAGATGGATGCAGTGGTTGGAAAGAATAGAATAGTAGAAGAATCAGATATTGTCAACCTTCCCTACCTACAAGCCATTGTTAGAGAAACATTTAGGCTTCACCCAGCTGGTCCATTGGTTGTTAGAGAGTCATCAAGAAGTGCAGTGGTTTGTGGATATGATATTCCAGCCAAAACTCGATTATTTGTCAATGTTTGGGCTATTGGTAGGGACCCCAATCATTGGGAGAACCCTTTTGAGTTCAGGCCAGAGAGGTTTATAAAAGATGGGCAGAGTCAATTGGATGTTAGGGGACAAAATTTTCATCTACTTCCGTTCGGGAGTGGAAGAAGAGGGTGTCCTGGTGCTTCTCTGGGGTTGCAAGTTGTGCATGTGAATTTGGCTATTATGATTCAGTGTTTCCAGTGGAAGGTTGATGGTGGCAATGGAAAGGTGGACATGGAAGAGAAGTCTGGCATCACTCTTCCGAGGGCTCACCCCATAATTTGTGTCCCTGTTCCAAGGCTTGATCCATTTCCTGCTATGTGA 1803 0.4725 MPATWLTSIQNFAGWKATVIAHPTLASPLEVHSDIGFTIRGKGTSDFNPTILSSMWFERHHEWDCSIPKNQVCCFHRVVSDKEDNASSAKMVTTRADRVLLICLVFTILFASILWRKQNKTLLPPSPKALPIIGHLHLLSSIPHQDFHKLSIRYGPIMHLFLGSVHCVVASTAEAAKEFLKTHENSFSNRPSKTAAIETFSYGCQDFLFAPYGPAWKFMKKLCMSELLGGRMLDQFLPVRRQETLRFVKRVLRKGIAGEAVDFEGELMTLSNDIVSRMTVSQTSENENEAEEMRKLVSDVAELMGTFNMSDFIWCLKPFDLQGFNKRLKKTWNRFDAVLDRIIKQREEERRNNREAGGTRQFKDMLDVLLDIFEDENSEMKLNKENIKSFIMDIFVAGTDTSAVTIEWAMAELINNPCVLEKARQEMDAVVGKNRIVEESDIVNLPYLQAIVRETFRLHPAGPLVVRESSRSAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFIKDGQSQLDVRGQNFHLLPFGSGRRGCPGASLGLQVVHVNLAIMIQCFQWKVDGGNGKVDMEEKSGITLPRAHPIICVPVPRLDPFPAM 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02652 600 Gene3D Cytochrome P450 116 595 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 Pfam Cytochrome P450 124 588 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 SUPERFAMILY Cytochrome P450 124 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 151 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 489 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 175 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 386 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 538 561 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 406 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 528 538 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PANTHER CYTOCHROME P450 98A9 103 595 - -
Pumo5g02652 600 FunFam Cytochrome P450 family protein 115 588 - -
Pumo5g02652 600 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 531 540 IPR017972 GO:0005506|GO:0016705
Pumo5g02652 600 CDD CYP93 155 590 - -
Pumo5g02652 600 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS P450 superfamily signature 529 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02652 600 PRINTS P450 superfamily signature 397 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02652 Pumo-Chr5 72641867 72646023 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02652 99 593 Cytochrome P450 AT5G06900 50.201 2.30e-177 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02652 K24188 - gmx:100815706 819.305