Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02645 ATGTTCCTCTTTCGAAAACTCAACGCTCATCATGGCTTCATGATCCTTAAACTTAAACCCTGGCAAAACCCTAGGTTCCAGAGCACGAAGAGAGCCCCCGAATCCGCCACCAAAATCATCGGAAAAACCACCATTAAAGAAGCCCAAGCCGCATTGCTCGAGTACCTCCACTCCACGCGAAGCCTCAACATCCTAGACGCCGACAACATGTGCACCAACTCACCCTCCTTCCTCCACGACCTCCTCCTCAAAACCCAATCCCAATCCCAATCCCAAACGCACCACCTCAGCAACACCACCAAACGCTCCATCTCGCGCTACCTCCGCTACCACCCCATCAACGAGTTCGAACCCTTCTTCGAGAGCGCCGGCCTCACCCCTCCCGAGTACGCCCCCCTTCTCCCGCGCGACATGATTTACCTAAACGACGACGTTTTACTCATGGACAATTACCACACGCTCTGCAACTACGGCGTTCCCCGCACCAAGATGGGGAGGGTTTTCAAACTAACCCCTCAGGTGTTCCGTTACAAATCCGGGGTTTTGATCTCCAAGCTTCGGGGTTATGAAAATTTGGGTGTTGCACCGACTACATTGGCACGTGTGGTTGCTTCTAGCCCCTGCATTTTGGTTGGGGGTGTTGATTTTGATTTTGTTCAGGTTGTGGAGAAGTTGAAGGGTATTACTGGAAAGGATGCTAATTGGATTGGGGACAATTTCTTGAATAATGAGGGTTGTTGTAATTGGGGGATAGTGCTTCATGTTTTGAGTTTGCTTTCTAGGGTTTACACTGAGGAACAGTTGGGTGATTTAATCACTCGTCACCCTTGTTTAATTTTTGAGGAGTCTGGAGGAAGTGTGTTATGCCTGATTAACTTTTTGTTCAAATTTGGGTTGTCTATGAACCAGGTTTCTCTCATGCTTCTCGAGTTTCCACAGATTCGGGTTGCAAAATTTTTGTCCAACTTGACGCTGTGTTTTCTGTTCTTGACTGAGATTGAGATGGAGCCTTCTGAGATTGGGAAGGTTTTGCAGTCTCACTGCTTGCTGTTAGGTTCCTTCACTATGAAGAAAACGATTACTTTGCTTACTAACTTGAACGTTGGCAAGAAGCGGCTGTGTAGACTTGTGAGGGATGATCCTCTAGTAATGAAGAGTTGGGCTCTGGGAAGGAGGATTCAGCCTTTGGTCGGCTCGTATTTGGAGTATGAATCAAAGGAGCAGAAGAAGAAGTTCATGCTGAAGTTGGGGTATGTGGAGAACTCGAAGAAAATGAATGAGACGATTAGGTTGTTCAGAGGTAAGGGAGCTGAGCTTCAGGAGAGACTTGATTTTATTGTTAACAAAGCTGGGTTGGACTTATGA 1365 0.4725 MFLFRKLNAHHGFMILKLKPWQNPRFQSTKRAPESATKIIGKTTIKEAQAALLEYLHSTRSLNILDADNMCTNSPSFLHDLLLKTQSQSQSQTHHLSNTTKRSISRYLRYHPINEFEPFFESAGLTPPEYAPLLPRDMIYLNDDVLLMDNYHTLCNYGVPRTKMGRVFKLTPQVFRYKSGVLISKLRGYENLGVAPTTLARVVASSPCILVGGVDFDFVQVVEKLKGITGKDANWIGDNFLNNEGCCNWGIVLHVLSLLSRVYTEEQLGDLITRHPCLIFEESGGSVLCLINFLFKFGLSMNQVSLMLLEFPQIRVAKFLSNLTLCFLFLTEIEMEPSEIGKVLQSHCLLLGSFTMKKTITLLTNLNVGKKRLCRLVRDDPLVMKSWALGRRIQPLVGSYLEYESKEQKKKFMLKLGYVENSKKMNETIRLFRGKGAELQERLDFIVNKAGLDL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02645 454 Gene3D Transcription termination factor 3, mitochondrial 71 248 IPR038538 -
Pumo5g02645 454 Gene3D Transcription termination factor 3, mitochondrial 286 454 IPR038538 -
Pumo5g02645 454 Pfam mTERF 263 408 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02645 Pumo-Chr5 72552003 72553367 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo5g02645 mTERF 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02645 - - gmx:100807690 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02645 5 72552003 72553367 Pumo5g02645 5 72552003 72553367 ECH