Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02644 ATGATTCGAGATTCCCCGCGGATTCTTAATCAGACCACAGATAGGATCAGCATGAAAATTGAGAATCTTGTGAGTATAGGATATTCTATATCGGATTTAGCGAGTTTTCCTTCCTTTCTTTCCTATTCGCCTCAAAGAGTTAAGCTGAGGTTTTCAATGTATAATTGGCTCAAAGAACATGGAGCTGTAGAAGCAGGGCTTGCTTTGAGCACTATAATTGCATGCTCTGATAAAGCGTTTGAGAAGCTGTATGTGAAGCGCCATCCATCTGGCCTTCAAGTTTGGCAGGATTTGAAGGCACAAATTTCTTCTAAAGTTTAG 321 0.405 MIRDSPRILNQTTDRISMKIENLVSIGYSISDLASFPSFLSYSPQRVKLRFSMYNWLKEHGAVEAGLALSTIIACSDKAFEKLYVKRHPSGLQVWQDLKAQISSKV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02644 106 PANTHER CGI-12 PROTEIN-RELATED 1 88 IPR003690 GO:0003690|GO:0006355
Pumo5g02644 106 Gene3D Transcription termination factor 3, mitochondrial 1 98 IPR038538 -
Pumo5g02644 106 Pfam mTERF 1 81 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo5g02644 mTERF 3.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02644 - - gmx:100807690 201.83